RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SLC30A8Q8IWU4 369 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 OR8J3Q8NGG0 315 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 TXNDC15Q96J42 360 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 ZNF317Q96PQ6 595 aaPredicted RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 PRSS27Q9BQR3 290 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 KATNB1Q9BVA0 655 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CCDC134Q9H6E4 229 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 FKRPQ9H9S5 495 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 BARX1Q9HBU1 254 aaPredicted RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 NOX3Q9HBY0 568 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CRLF2Q9HC73 371 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 SELENONQ9NZV5 590 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 SLC7A7Q9UM01 511 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 IGHV4-30-2A0A087WSY4 118 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 BBIP1A8MTZ0 92 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 M0R3G1 203 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
LIG1-212ENST00000596549 PLPP3O14495 311 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 AKAP8O43823 692 aaKnown RBP11.35□□□□□ -0.59
LIG1-212ENST00000596549 SSX4O60224 188 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 NUDT6P53370 316 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 ZNF74Q16587 644 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
LIG1-212ENST00000596549 CARD17Q5XLA6 110 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 SLC46A3Q7Z3Q1 461 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 SNX32Q86XE0 403 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 C20orf196Q8IYI0 205 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 DEPDC4Q8N2C3 294 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 GPR137CQ8N3F9 429 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 PIK3C3Q8NEB9 887 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 ASPNQ9BXN1 380 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 REG4Q9BYZ8 158 aa11.35□□□□□ -0.59
LIG1-212ENST00000596549 SLC35F4A4IF30 521 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 TRAPPC13A5PLN9 417 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
LIG1-212ENST00000596549 SERPINI2O75830 405 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 LY6HO94772 140 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 APOBEC3AP31941 199 aaPredicted RBP11.34□□□□□ -0.59
LIG1-212ENST00000596549 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 SWI5Q1ZZU3 235 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 LRRC17Q8N6Y2 441 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 ZNF525Q8N782 197 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 OR5J2Q8NH18 312 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 ZNF583Q96ND8 569 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 MEPEQ9NQ76 525 aaPredicted RBP11.34□□□□□ -0.59
LIG1-212ENST00000596549 CA10Q9NS85 328 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 ARMCX1Q9P291 453 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 NOX1Q9Y5S8 564 aa11.34□□□□□ -0.59
LIG1-212ENST00000596549 FAM220BPB1ANY3 271 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 SHOX2O60902 331 aaPredicted RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 IDH3GP51553 393 aaPredicted RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 UGT2B15P54855 530 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 CAMK2DQ13557 499 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 CYLC2Q14093 348 aaPredicted RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 MELKQ14680 651 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 MAPRE2Q15555 327 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 MMEL1Q495T6 779 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 PXKQ7Z7A4 578 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 MDP1Q86V88 176 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 CARM1Q86X55 608 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 PRIMA1Q86XR5 153 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 C10orf53Q8N6V4 93 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 OR10H5Q8NGA6 315 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 SLC26A7Q8TE54 656 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 FBXO17Q96EF6 278 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 ADAD1Q96M93 576 aaKnown RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 ZNF75AQ96N20 296 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 SORCS2Q96PQ0 1159 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 TAS2R5Q9NYW4 299 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
LIG1-212ENST00000596549 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
LIG1-212ENST00000596549 ANK3Q12955 4377 aaKnown RBP11.32□□□□□ -0.6
LIG1-212ENST00000596549 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 KRT34O76011 436 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 CH25HO95992 272 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 NPPAP01160 153 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 CRYAAP02489 173 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
LIG1-212ENST00000596549 IFNGR1P15260 489 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 B4GALT1P15291 398 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 CBR1P16152 277 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 AHCYP23526 432 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 BIDP55957 195 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 HGFACQ04756 655 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 NPRL3Q12980 569 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ADIPOQQ15848 244 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms