RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 UMPSP11172 480 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 TCN1P20061 433 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-206ENST00000588423 ART1P52961 327 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 ROR2Q01974 943 aaKnown RBP14.08□□□□□ -0.16
RETREG3-206ENST00000588423 BSPH1Q075Z2 132 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 LGALS3BPQ08380 585 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 DEFB113Q30KQ7 82 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 KLHL17Q6TDP4 642 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 TMEM108Q6UXF1 575 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 SPNS3Q6ZMD2 512 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 NANOGNBQ7Z5D8 188 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 CYP4Z1Q86W10 505 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 C20orf196Q8IYI0 205 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 RNF113BQ8IZP6 322 aaKnown RBP14.08□□□□□ -0.16
RETREG3-206ENST00000588423 ARHGAP24Q8N264 748 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 GPR137CQ8N3F9 429 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 LRRC17Q8N6Y2 441 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 FAM156AQ8NDB6 213 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 RADILQ96JH8 1075 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 UBTD1Q9HAC8 227 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 GPR35Q9HC97 309 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 MAN2C1Q9NTJ4 1040 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 C20orf141Q9NUB4 165 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 BEX4Q9NWD9 120 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-206ENST00000588423 MED29Q9NX70 200 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 MGAT4BQ9UQ53 548 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 ENPP4Q9Y6X5 453 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 AKAP9Q99996 3911 aa14.08□□□□□ -0.16
RETREG3-206ENST00000588423 OTOGQ6ZRI0 2925 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 ARPC4-TTLL3A0A0A6YYG9 625 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 ZNF726A6NNF4 738 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 C11orf98E9PRG8 122 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 J3KTA2 159 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 HS3ST1O14792 307 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 RNF13O43567 381 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 TMCC2O75069 709 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 PLAUP00749 431 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 FUT1P19526 365 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 PTAFRP25105 342 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 YAP1P46937 504 aaKnown RBP14.07□□□□□ -0.16
RETREG3-206ENST00000588423 PRPS1P60891 318 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 ANKRD16Q6P6B7 361 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 KLHL24Q6TFL4 600 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
RETREG3-206ENST00000588423 ZNF611Q8N823 705 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 OR6X1Q8NH79 312 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 ACOT11Q8WXI4 607 aaPredicted RBP14.07□□□□□ -0.16
RETREG3-206ENST00000588423 BCL2L2Q92843 193 aaPredicted RBP14.07□□□□□ -0.16
RETREG3-206ENST00000588423 PIGTQ969N2 578 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 TXNDC15Q96J42 360 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 EMC6Q9BV81 110 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 CRLF2Q9HC73 371 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 MOV10Q9HCE1 1003 aaKnown RBP14.07□□□□□ -0.16
RETREG3-206ENST00000588423 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
RETREG3-206ENST00000588423 NPIPB13A6NJU9 1138 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 B2RBV5 119 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 NPIPB4C9JG80 1138 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 BLOC1S5-TXNDC5H3BN57 136 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 ARPC2O15144 300 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 IFNGR1P15260 489 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 RHCEP18577 417 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 ZNF672Q499Z4 452 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 SLC35D2Q76EJ3 337 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 RBM15BQ8NDT2 890 aaKnown RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 LILRB1Q8NHL6 650 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 AKAP1Q92667 903 aaKnown RBP eCLIP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 BPIFA2Q96DR5 249 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 PYURFQ96I23 114 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 NSMCE2Q96MF7 247 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 C1orf21Q9H246 121 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 NDUFAF4Q9P032 175 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 RHCGQ9UBD6 479 aa14.06□□□□□ -0.16
RETREG3-206ENST00000588423 FAM32AQ9Y421 112 aaKnown RBP14.06□□□□□ -0.16
RETREG3-206ENST00000588423 RAI1Q7Z5J4 1906 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-206ENST00000588423 A0A1W2PR80 420 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 A0A1W2PRQ8 180 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 ZNF99A8MXY4 864 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-206ENST00000588423 CLOCKO15516 846 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 PIP5K1CO60331 668 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 SEMG1P04279 462 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 T-ENOLP0DO92 83 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 IFI30P13284 250 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 ITGA2P17301 1181 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 CD40P25942 277 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 ZNF83P51522 516 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 BIDP55957 195 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 UBE2NP61088 152 aaKnown RBP14.05□□□□□ -0.16
RETREG3-206ENST00000588423 PRKCDQ05655 676 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 RPL18Q07020 188 aaKnown RBP14.05□□□□□ -0.16
RETREG3-206ENST00000588423 CAMK2DQ13557 499 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 DGCR6Q14129 220 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 CEACAM16Q2WEN9 425 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 C3orf36Q3SXR2 165 aa14.05□□□□□ -0.16
RETREG3-206ENST00000588423 ANKDD1AQ495B1 522 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms