RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 ULK3Q6PHR2 472 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 OR11H4Q8NGC9 324 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 C7orf50Q9BRJ6 194 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 IFT46Q9NQC8 304 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ADAM29Q9UKF5 820 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 HCRTR1O43613 425 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF169Q14929 603 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 CBLN3Q6UW01 205 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ETFBKMTQ8IXQ9 262 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 IL17RCQ8NAC3 791 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 OR11H7Q8NGC8 314 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 OR14I1A6ND48 311 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 HPXP02790 462 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 CTHP32929 405 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 SNU13P55769 128 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ACTC1P68032 377 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ACTA1P68133 377 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 ST3GAL2Q16842 350 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 HEPHL1Q6MZM0 1159 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 KLHL24Q6TFL4 600 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 LRRC56Q8IYG6 542 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 VSX1Q9NZR4 365 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 CD207Q9UJ71 328 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 NUBP2Q9Y5Y2 271 aa12.61□□□□□ -0.39
CACNA1A-209ENST00000587525 NPIPB8E9PQR5 432 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 AHSA1O95433 338 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 RECKO95980 971 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 WNT1P04628 370 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF28P17035 718 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 PSMA3P25788 255 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 C1QL3Q5VWW1 255 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 TCTE3Q8IZS6 198 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF615Q8N8J6 731 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SFXN5Q8TD22 340 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 CXorf58Q96LI9 332 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 GDE1Q9NZC3 331 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SCN8AQ9UQD0 1980 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 CTNSO60931 367 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 ACSM4P0C7M7 580 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF35P13682 527 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 HOXB9P17482 250 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 GPR143P51810 404 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 TRA2BP62995 288 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 AADACL4Q5VUY2 407 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 B3GNTL1Q67FW5 361 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 TMEM91Q6ZNR0 172 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 DGAT2L6Q6ZPD8 337 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 NLRC3Q7RTR2 1065 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 NUP54Q7Z3B4 507 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 FAM71F1Q96KD3 344 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 BCL2L14Q9BZR8 327 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 PDE7BQ9NP56 450 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 IL20Q9NYY1 176 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 KCND3Q9UK17 655 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 TRAPPC4Q9Y296 219 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 GPR171O14626 319 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SRMP19623 302 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SLC2A5P22732 501 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 PEBP1P30086 187 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 SWI5Q1ZZU3 235 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 OR51Q1Q8NH59 317 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 ZPLD1Q8TCW7 415 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 OR10A5Q9H207 317 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 MRTO4Q9UKD2 239 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 MAFFQ9ULX9 164 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 DHDHQ9UQ10 334 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 DTX4Q9Y2E6 619 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 VCANP13611 3396 aa12.6□□□□□ -0.39
CACNA1A-209ENST00000587525 A0A087WV48 116 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 A0A0J9YY10 115 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 NPIPA5E9PKD4 350 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 SYT5O00445 386 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 GMDSO60547 372 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 SCGB1D2O95969 90 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 F10P00742 488 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 ADRB1P08588 477 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 SELENOPP49908 381 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 S100A10P60903 97 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms