RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 MED29Q9NX70 200 aa18.71■□□□□ 0.59
PPP4R1-228ENST00000584074 ARMCX1Q9P291 453 aa18.71■□□□□ 0.59
PPP4R1-228ENST00000584074 SLC7A7Q9UM01 511 aa18.71■□□□□ 0.59
PPP4R1-228ENST00000584074 CAPN7Q9Y6W3 813 aa18.71■□□□□ 0.59
PPP4R1-228ENST00000584074 NSD1Q96L73 2696 aaPredicted RBP18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 M0R3G1 203 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 AKAP8O43823 692 aaKnown RBP18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 TNFRSF1BP20333 461 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 AHCYP23526 432 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 CEACAM16Q2WEN9 425 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF544Q6NX49 715 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 PCYOX1LQ8NBM8 494 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 C10orf82Q8WW14 230 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 RASSF5Q8WWW0 418 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 SLC38A2Q96QD8 506 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 MED4Q9NPJ6 270 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 GID8Q9NWU2 228 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 SH3GLB1Q9Y371 365 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 NOX1Q9Y5S8 564 aa18.7■□□□□ 0.58
PPP4R1-228ENST00000584074 SLC35F4A4IF30 521 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 RNF223E7ERA6 249 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 KPNA4O00629 521 aaPredicted RBP18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 SERPINI2O75830 405 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 SEC14L2O76054 403 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 CH25HO95992 272 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 MT-ATP6P00846 226 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 MDH1P40925 334 aaKnown RBP18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 TTC33Q6PID6 262 aaPredicted RBP18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 PXKQ7Z7A4 578 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 CARM1Q86X55 608 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 C20orf196Q8IYI0 205 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 POU5F2Q8N7G0 328 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 MAPK1IP1LQ8NDC0 245 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 OR5J2Q8NH18 312 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 PROX1Q92786 737 aa18.69■□□□□ 0.58
PPP4R1-228ENST00000584074 ADORA3P0DMS8 318 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 CAMK2DQ13557 499 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF74Q16587 644 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 ERICH5Q6P6B1 374 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 DNM1P46Q6ZS02 220 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 LRRC17Q8N6Y2 441 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 HTRA1Q92743 480 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 RCN3Q96D15 328 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 MPP4Q96JB8 637 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 ADAD1Q96M93 576 aaKnown RBP18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 PRSS27Q9BQR3 290 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF426Q9BUY5 554 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 SEC61A2Q9H9S3 476 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 BARX1Q9HBU1 254 aaPredicted RBP18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 CRNNQ9UBG3 495 aaPredicted RBP18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 BAG5Q9UL15 447 aa18.68■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF503-AS2A6NEH8 195 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 C11orf98E9PRG8 122 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 SLC22A2O15244 555 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 SSX4O60224 188 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 SHOX2O60902 331 aaPredicted RBP18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 CECR9P0C854 216 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 HOXB1P14653 301 aaPredicted RBP18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 APOBEC3AP31941 199 aaPredicted RBP18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 LRR1Q96L50 414 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 KATNB1Q9BVA0 655 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 REG4Q9BYZ8 158 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 TAS2R5Q9NYW4 299 aa18.67■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF726A6NNF4 738 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF99A8MXY4 864 aaPredicted RBP18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 FAM220BPB1ANY3 271 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 OR6A2O95222 327 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 IGLV1-44P01699 117 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 CRYAAP02489 173 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 CELA3BP08861 270 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 IFNGR1P15260 489 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 PAX7P23759 505 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 OR1E2P47887 323 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 NAAAQ02083 359 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 KRTAP21-3Q3LHN1 58 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 MYPOPQ86VE0 399 aaPredicted RBP18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 FAM169BQ8N8A8 192 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 OR2T12Q8NG77 320 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 KCNS3Q9BQ31 491 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 SLC19A3Q9BZV2 496 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 MEPEQ9NQ76 525 aaPredicted RBP18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 NANSQ9NR45 359 aa18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 GMPR2Q9P2T1 348 aaKnown RBP18.66■□□□□ 0.58
PPP4R1-228ENST00000584074 IFNA14P01570 189 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 IGKV3-15P01624 115 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 CBR1P16152 277 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 NUDT6P53370 316 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 BIDP55957 195 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 TAS2R41P59536 307 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 RAB35Q15286 201 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 C3orf36Q3SXR2 165 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 LRRC23Q53EV4 343 aaPredicted RBP18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 CYBRD1Q53TN4 286 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 DEF8Q6ZN54 512 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 OR6N1Q8NGY5 312 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 FBXO17Q96EF6 278 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 B3GAT2Q9NPZ5 323 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 CMTM6Q9NX76 183 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 ZNF229Q9UJW7 825 aa18.65■□□□□ 0.58
PPP4R1-228ENST00000584074 H7C417 338 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms