RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	MRPS21	P82921	87 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRDX1	Q06830	199 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GPR68	Q15743	365 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ENTPD8	Q5MY95	495 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TMEM91	Q6ZNR0	172 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063		Q6ZSR6	202 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CXXC5	Q7LFL8	322 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF761	Q86XN6	746 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC16A11	Q8NCK7	471 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RNASE11	Q8TAA1	199 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZCCHC10	Q8TBK6	192 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MS4A6E	Q96DS6	147 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ORAI3	Q9BRQ5	295 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CNTD2	Q9H8S5	307 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ACTR10	Q9NZ32	417 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLCO1B1	Q9Y6L6	691 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MUC22	E2RYF6	1773 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CIB4	A0PJX0	185 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	DKK1	O94907	266 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RPN2	P04844	631 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	DRD5	P21918	477 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	S100A7	P31151	101 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RPS5	P46782	204 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GZMK	P49863	264 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RGS8	P57771	180 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	E2F1	Q01094	437 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	BNC1	Q01954	994 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	POU4F3	Q15319	338 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	VASN	Q6EMK4	673 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZC3H14	Q6PJT7	736 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	FAM111B	Q6SJ93	734 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR10G6	Q8NH81	332 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	BMF	Q96LC9	184 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ABCG5	Q9H222	651 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TCF7L1	Q9HCS4	588 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRDM7	Q9NQW5	492 aa		10.64	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TTC28	Q96AY4	2481 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ARHGEF9	O43307	516 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NT5E	P21589	574 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GABRA5	P31644	462 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MAGEB1	P43366	347 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CCR6	P51684	374 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TDG	Q13569	410 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC25A35	Q3KQZ1	300 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	AKIRIN2	Q53H80	203 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	C3orf38	Q5JPI3	329 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RIPPLY2	Q5TAB7	128 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRSS45	Q7RTY3	260 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	C16orf62	Q7Z3J2	963 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GPR135	Q8IZ08	494 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF614	Q8N883	585 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PFN4	Q8NHR9	129 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	HLA-C	Q95604	372 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CPNE4	Q96A23	557 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRRC1	Q96M27	445 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC38A2	Q96QD8	506 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRDM6	Q9NQX0	595 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PISD	Q9UG56	409 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ACSL5	Q9ULC5	683 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MMP17	Q9ULZ9	603 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC7A7	Q9UM01	511 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ARRDC5	A6NEK1	342 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC43A1	O75387	559 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RHBDL1	O75783	438 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CXCL3	P19876	107 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	HIST1H1T	P22492	207 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ATP5A1	P25705	553 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GCGR	P47871	477 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF41	P51814	821 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	BTN3A2	P78410	334 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RAB40B	Q12829	278 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TPBG	Q13641	420 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MFSD13A	Q14CX5	517 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	LRRC18	Q8N456	261 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CACNG8	Q8WXS5	425 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PHYHIP	Q92561	330 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	AP3S1	Q92572	193 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC25A36	Q96CQ1	311 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR7D2	Q96RA2	312 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MCHR1	Q99705	422 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MAP3K3	Q99759	626 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TMEM43	Q9BTV4	400 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLA2	Q9H6Q3	261 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	C20orf141	Q9NUB4	165 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NDOR1	Q9UHB4	597 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RASD1	Q9Y272	281 aa		10.63	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TRABD2B	A6NFA1	517 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NTS	P30990	170 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RAB28	P51157	221 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SMIM11A	P58511	58 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RRAS2	P62070	204 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PPP3R1	P63098	170 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZSWIM7	Q19AV6	140 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PAN3	Q58A45	887 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ABHD17C	Q6PCB6	329 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	METAP1D	Q6UB28	335 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RFLNB	Q8N5W9	214 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NUP43	Q8NFH3	380 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms