RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 RFXANKO14593 260 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 AIM2O14862 343 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 PPIHO43447 177 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 RP2O75695 350 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HLA-DOBP13765 273 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 EPHA1P21709 976 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 GRPRP30550 384 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 CRATP43155 626 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 SLC1A6P48664 564 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TMEM33P57088 247 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 DSTNP60981 165 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 LRRC74AQ0VAA2 488 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 FXNQ16595 210 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 C6orf89Q6UWU4 347 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 WDFY1Q8IWB7 410 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 C20orf196Q8IYI0 205 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TMEM19Q96HH6 336 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 EMC6Q9BV81 110 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 G6PC2Q9NQR9 355 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 PNPOQ9NVS9 261 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ZNF232Q9UNY5 417 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 GPR45Q9Y5Y3 372 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 WNK2Q9Y3S1 2297 aa12.67□□□□□ -0.38
CDK5RAP3-226ENST00000583182 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TRAV20A0A0B4J274 112 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 LOC102725191A0A1B0GVB3 256 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MS4A18H0YCH9 400 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 SDHDO14521 159 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 PNPP00491 289 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HPRP00739 348 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 NAT2P11245 290 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 CBLP22681 906 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 AQP5P55064 265 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MS4A18Q3C1V0 323 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 GTDC1Q4AE62 458 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 FAM69AQ5T7M9 428 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ZNF813Q6ZN06 617 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.384e-10■□□□□ 9.4
CDK5RAP3-226ENST00000583182 RBM4Q9BWF3 364 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 RSPO3Q9BXY4 272 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ROPN1BQ9BZX4 212 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ROPN1Q9HAT0 212 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 NOX1Q9Y5S8 564 aa12.66□□□□□ -0.38
CDK5RAP3-226ENST00000583182 A0A0G2JPF8 293 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HNRNPCL2B2RXH8 293 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HNRNPCL3B7ZW38 293 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 BIRC5O15392 142 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 AKAP8O43823 692 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 OR2T1O43869 369 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HNRNPCL1O60812 293 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 HNRNPCL4P0DMR1 293 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 B4GALT1P15291 398 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 BGNP21810 368 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MAGEB1P43366 347 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 GIPRP48546 466 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 PTDSS1P48651 473 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MRPS11P82912 194 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MYBPC1Q00872 1141 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ZNF311Q5JNZ3 666 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 REP15Q6BDI9 236 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 NHLRC1Q6VVB1 395 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 VPS33AQ96AX1 596 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 ARMC7Q9H6L4 198 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 TPT1P8Q9HAU6 139 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 DUSP13Q9UII6 198 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 IFT52Q9Y366 437 aa12.65□□□□□ -0.38
CDK5RAP3-226ENST00000583182 A0A1B0GWA3 101 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 NUDT7P0C024 238 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 HTR2AP28223 471 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 RPS23P62266 143 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 RAB1AP62820 205 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 GALK2Q01415 458 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ALKBH6Q3KRA9 238 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 AWAT1Q58HT5 328 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 LRR1Q96L50 414 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ZNF416Q9BWM5 594 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 TMPRSS13Q9BYE2 586 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 C12orf10Q9HB07 376 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 ESM1Q9NQ30 184 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 KLHL14Q9P2G3 628 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 RPS6KB2Q9UBS0 482 aa12.64□□□□□ -0.39
CDK5RAP3-226ENST00000583182 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms