RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ABHD17BQ5VST6 288 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 PRAMEF20Q5VT98 475 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 BICRALQ6AI39 1079 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 JMJD6Q6NYC1 403 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 C16orf87Q6PH81 154 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 PAQR6Q6TCH4 344 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ARSKQ6UWY0 536 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 H1FNTQ75WM6 255 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 FAM220AQ7Z4H9 259 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 PPP1R32Q7Z5V6 425 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 KLBQ86Z14 1044 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SLC35F2Q8IXU6 374 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 OR2T27Q8NH04 317 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SLC25A43Q8WUT9 341 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 SPRYD4Q8WW59 207 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 THAP4Q8WY91 577 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 RPL3LQ92901 407 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 ZBTB8AQ96BR9 441 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 RASD2Q96D21 266 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 DNAJA3Q96EY1 480 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 THOC3Q96J01 351 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 CEP19Q96LK0 163 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 FER1L6-AS2Q96M78 137 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ADAD1Q96M93 576 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 COQ7Q99807 217 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 JAM3Q9BX67 310 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 WDR12Q9GZL7 423 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 NUAK2Q9H093 628 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 MMP27Q9H306 513 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 RPRD1BQ9NQG5 326 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 NDUFB11Q9NX14 153 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 BABAM2Q9NXR7 383 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 MRPL39Q9NYK5 338 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 CRNNQ9UBG3 495 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 IL17BQ9UHF5 180 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ZNF346Q9UL40 294 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 NOX1Q9Y5S8 564 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 HEATR5AQ86XA9 2040 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 IGLV3-32A0A0A0MS00 114 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 TRIM64BA6NI03 449 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 GJE1A6NN92 205 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 B8ZZF3 427 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 H3BML4 177 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 MKRN2OSH3BPM6 223 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF354AO60765 605 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 CBR3O75828 277 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 IGHA1P01876 353 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 PRB1P04280 392 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 LIMS3P0CW19 117 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 LIMS4P0CW20 117 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 CLUP10909 449 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 SPI1P17947 270 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 WT1P19544 449 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 CELP19835 753 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 MST1P26927 711 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 DPP4P27487 766 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ADH6P28332 368 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 UQCRC1P31930 480 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 NAA10P41227 235 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 CYB561P49447 251 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 RORCP51449 518 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 GAS1P54826 345 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 DSCR4P56555 118 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 BDH1Q02338 343 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 HSF2Q03933 536 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 FOXF1Q12946 379 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 CHAF1BQ13112 559 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 AQP6Q13520 282 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 GPR50Q13585 617 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 TPBGQ13641 420 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 DEFB109BQ30KR1 87 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 LINC00303Q3SY05 128 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF404Q494X3 552 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 FAM205BPQ63HN1 556 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 TMEM225Q6GV28 225 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF544Q6NX49 715 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 C3orf33Q6P1S2 294 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 DNM1P34Q6PK57 102 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF322Q6U7Q0 402 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 B3GLCTQ6Y288 498 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 PLEKHG7Q6ZR37 379 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 PHC2Q8IXK0 858 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ZNF843Q8N446 348 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 SIRT6Q8N6T7 355 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 TMEM99Q8N816 258 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 SCAIQ8N9R8 606 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 NPEPL1Q8NDH3 523 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 OR2M3Q8NG83 312 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 OR51L1Q8NGJ5 315 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 BORCS5Q969J3 196 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms