RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 HPRP00739 348 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 VIMP08670 466 aaKnown RBP10.03□□□□□ -0.8
SSH2-208ENST00000579040 CBLP22681 906 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 PCGF2P35227 344 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 ARR3P36575 388 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 CDH12P55289 794 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 MTPNP58546 118 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 TUBA1BP68363 451 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 TUBA4AP68366 448 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 VLDLRP98155 873 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 POU3F1Q03052 451 aaPredicted RBP10.03□□□□□ -0.8
SSH2-208ENST00000579040 PMS2P3Q13401 168 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 NFYCQ13952 458 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 EFNB3Q15768 340 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 TMEM249Q2WGJ8 235 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 MS4A18Q3C1V0 323 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 INTS11Q5TA45 600 aaKnown RBP10.03□□□□□ -0.8
SSH2-208ENST00000579040 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 TUBA1AQ71U36 451 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 PXKQ7Z7A4 578 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 HIPK1Q86Z02 1210 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 C20orf196Q8IYI0 205 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 SMYD1Q8NB12 490 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 NUP37Q8NFH4 326 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 IL17RDQ8NFM7 739 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 HTRA1Q92743 480 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 MOGAT1Q96PD6 335 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 ZNF442Q9H7R0 627 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 KAT8Q9H7Z6 458 aaKnown RBP10.03□□□□□ -0.8
SSH2-208ENST00000579040 NPHS2Q9NP85 383 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 USP22Q9UPT9 525 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 COL6A5A8TX70 2615 aa10.03□□□□□ -0.8
SSH2-208ENST00000579040 A8MV72 311 aaPredicted RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 VSTM5A8MXK1 200 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 M0QX08 132 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 M0R3H8 397 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 NDUFS8O00217 210 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 PLPP3O14495 311 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 PPOXP50336 477 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 PDLIM4P50479 330 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 IDH3GP51553 393 aaPredicted RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 SELPLGQ14242 412 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 DUSP7Q16829 419 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 TRMT5Q32P41 509 aaKnown RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 NHLRC1Q6VVB1 395 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 ZNF627Q7L945 461 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 SLC46A3Q7Z3Q1 461 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 C10orf53Q8N6V4 93 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 GPR32P1Q8NGA4 272 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 OR5J2Q8NH18 312 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 ZNF837Q96EG3 531 aaPredicted RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 SORCS2Q96PQ0 1159 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 WFDC6Q9BQY6 131 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 PLK3Q9H4B4 646 aa10.02□□□□□ -0.81
SSH2-208ENST00000579040 DENND2DQ9H6A0 471 aaPredicted RBP10.02□□□□□ -0.81
SSH2-208ENST00000579040 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 A0A0G2JND7 137 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 SLC35F4A4IF30 521 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 TRAPPC13A5PLN9 417 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 ZNF726A6NNF4 738 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 M0R3G1 203 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 GPRIN2O60269 458 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 OPN1SWP03999 348 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 CELA3BP08861 270 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 OR4A8P0C604 315 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 HLA-DOBP13765 273 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 CD247P20963 164 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 USF1P22415 310 aaPredicted RBP10.01□□□□□ -0.81
SSH2-208ENST00000579040 CALCRP30988 508 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 HGFACQ04756 655 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 CYLC2Q14093 348 aaPredicted RBP10.01□□□□□ -0.81
SSH2-208ENST00000579040 NPTX1Q15818 432 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 ENTPD8Q5MY95 495 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 PHYHD1Q5SRE7 291 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 C6orf52Q5T4I8 152 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 CARD17Q5XLA6 110 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 MDP1Q86V88 176 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 OR6T1Q8NGN1 323 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 SLC26A7Q8TE54 656 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 ADAMTS16Q8TE57 1224 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
SSH2-208ENST00000579040 MPP4Q96JB8 637 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 SH3GL1Q99961 368 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 EMC6Q9BV81 110 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 ULBP2Q9BZM5 246 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 SLC19A3Q9BZV2 496 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 PCDHAC1Q9H158 963 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 TMEM160Q9NX00 188 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 MED29Q9NX70 200 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 B3GNT2Q9NY97 397 aa10.01□□□□□ -0.81
SSH2-208ENST00000579040 POFUT2Q9Y2G5 429 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms