RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SYS1Q8N2H4 156 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC41A2Q96JW4 573 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 C19orf43Q9BQ61 176 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 TRAF4Q9BUZ4 470 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC19A3Q9BZV2 496 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 RHBDD3Q9Y3P4 386 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 B3GALT1Q9Y5Z6 326 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 LAMB2P55268 1798 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 F11P03951 625 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 WNT1P04628 370 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 HMGA1P17096 107 aaKnown RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 ACHEP22303 614 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 VIPR2P41587 438 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 FXYD4P59646 89 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 NTHL1P78549 312 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC35D3Q5M8T2 416 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 PDSS1Q5T2R2 415 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 WBP2NLQ6ICG8 309 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 C3orf33Q6P1S2 294 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM81Q6P7N7 255 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 RHOUQ7L0Q8 258 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SIRT6Q8N6T7 355 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 MFSD9Q8NBP5 474 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM71CQ8NEG0 241 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GAREM1Q9H706 876 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF304Q9HCX3 659 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 WIF1Q9Y5W5 379 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM230AA0A1W2PPH8 454 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLCEO94923 617 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 B4GALNT1Q00973 533 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SULF2Q8IWU5 870 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 IL17RCQ8NAC3 791 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 LHFPL5Q8TAF8 219 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC22A8Q8TCC7 542 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 ABHD1Q96SE0 405 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 WDR76Q9H967 626 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 LRIT2A6NDA9 550 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ANKRD61A6NGH8 418 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 S100A8P05109 93 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SERPINA5P05154 406 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 GALP22466 123 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 RBM39Q14498 530 aaKnown RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 KIR2DS3Q14952 304 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TECPR1Q7Z6L1 1165 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 CHAC2Q8WUX2 184 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ULBP3Q9BZM4 244 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR52A5Q9H2C5 316 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 METTL7AQ9H8H3 244 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ICKQ9UPZ9 632 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TRAV1-2A0A0B4J238 106 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 IMPA2O14732 288 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SHOXO15266 292 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 STK17BO94768 372 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 DIRAS3O95661 229 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 IL5P05113 134 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ATF1P18846 271 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 CNR1P21554 472 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 CPT2P23786 658 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 NR0B1P51843 470 aaKnown RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SSX2Q16385 188 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 RSPO2Q6UXX9 243 aaPredicted RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 PLPP7Q8NBV4 271 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLAMF9Q96A28 289 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 RASD2Q96D21 266 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC35A4Q96G79 324 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SDHBP21912 280 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 GZMMP51124 257 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 MVDP53602 400 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 DUSP5Q16690 384 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 C17orf99Q6UX52 265 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TTLL10Q6ZVT0 673 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF683Q8IZ20 524 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR5M1Q8NGP8 315 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 NPRL2Q8WTW4 380 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SEMA4CQ9C0C4 833 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 SELENOIQ9C0D9 397 aa12.09□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms