RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 IGHMP01871 453 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 SLC6A6P31641 620 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 RPL4P36578 427 aaKnown RBP15.16■□□□□ 0.02
NUP88-210ENST00000574867 CLDN17P56750 224 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 FXYD6P3P58550 94 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 SLC25A35Q3KQZ1 300 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 XKRXQ6PP77 449 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 NHLRC1Q6VVB1 395 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 SLC35D2Q76EJ3 337 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 AAED1Q7RTV5 226 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 ZNF808Q8N4W9 903 aaPredicted RBP15.16■□□□□ 0.02
NUP88-210ENST00000574867 OR52L1Q8NGH7 329 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 APH1AQ96BI3 265 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 C9orf16Q9BUW7 83 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 PAPOLBQ9NRJ5 636 aaKnown RBP15.16■□□□□ 0.02
NUP88-210ENST00000574867 IL20Q9NYY1 176 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 POFUT2Q9Y2G5 429 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 MCIDASD6RGH6 385 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ZG16O60844 167 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 AGFG2O95081 481 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 IFNGR1P15260 489 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ZNF26P17031 533 aaPredicted RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 RFX4Q33E94 735 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 FAM205BPQ63HN1 556 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 KLHL17Q6TDP4 642 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 NUFIP2Q7Z417 695 aaKnown RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 BTLAQ7Z6A9 289 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 PARP8Q8N3A8 854 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ZNF775Q96BV0 537 aaPredicted RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 CIB1Q99828 191 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 RBM4BQ9BQ04 359 aaKnown RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 RBM4Q9BWF3 364 aaKnown RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 POLDIP3Q9BY77 421 aaKnown RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 TXNIPQ9H3M7 391 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 C12orf49Q9H741 205 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 PLSCR4Q9NRQ2 329 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ENOPH1Q9UHY7 261 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 RRP15Q9Y3B9 282 aaKnown RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 BCL10O95999 233 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 CD14P08571 375 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 OR3A2P47893 321 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 CTXN1P60606 82 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 PPP2R2BQ00005 443 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ACKR1Q16570 336 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 KDM4DQ6B0I6 523 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 DPY19L2P2Q6ZN68 376 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 MRGPRGQ86SM5 289 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ZNF100Q8IYN0 542 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 CA5BP1Q8WTZ4 195 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 ITLN2Q8WWU7 325 aaPredicted RBP15.15■□□□□ 0.02
NUP88-210ENST00000574867 EME1Q96AY2 570 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 KATNB1Q9BVA0 655 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 KRT84Q9NSB2 600 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 MED29Q9NX70 200 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 RELNP78509 3460 aa15.15■□□□□ 0.02
NUP88-210ENST00000574867 DIDO1Q9BTC0 2240 aaKnown RBP15.14■□□□□ 0.01
NUP88-210ENST00000574867 MSTNO14793 375 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 CGAP01215 116 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 APEHP13798 732 aaKnown RBP15.14■□□□□ 0.01
NUP88-210ENST00000574867 DAPP51397 102 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 NIPAL3Q6P499 406 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 TFAP2EQ6VUC0 442 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 THSD4Q6ZMP0 1018 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 IGFN1Q86VF2 1251 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 KIF18BQ86Y91 864 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 FAM26EQ8N5C1 309 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 RELL2Q8NC24 303 aaPredicted RBP15.14■□□□□ 0.01
NUP88-210ENST00000574867 OR6X1Q8NH79 312 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 LILRB4Q8NHJ6 448 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 EGLN3Q9H6Z9 239 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 RNPEPL1Q9HAU8 725 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 NRIP3Q9NQ35 241 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 TBC1D23Q9NUY8 699 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 REV1Q9UBZ9 1251 aa15.14■□□□□ 0.01
NUP88-210ENST00000574867 ZNF726A6NNF4 738 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 PDLIM1O00151 329 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
NUP88-210ENST00000574867 ZNF432O94892 652 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 CNOT4O95628 575 aaKnown RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 OSMP13725 252 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 IGFBP5P24593 272 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 RPS6KA3P51812 740 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 BIDP55957 195 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 RPL27P61353 136 aaKnown RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 GPR139Q6DWJ6 353 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 LIX1LQ8IVB5 337 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 TEX47Q8TBZ9 253 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 ASB10Q8WXI3 467 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SAMD8Q96LT4 415 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 OR2M2Q96R28 347 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SLCO5A1Q9H2Y9 848 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SMURF2Q9HAU4 748 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 USE1Q9NZ43 259 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 SLC35F4A4IF30 521 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 CLEC18AA5D8T8 446 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 CENPBD1B2RD01 187 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 EEF1E1-BLOC1S5C9J1V9 151 aa15.13■□□□□ 0.01
NUP88-210ENST00000574867 EEF1E1O43324 174 aaKnown RBP15.13■□□□□ 0.01
NUP88-210ENST00000574867 MGRN1O60291 552 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms