RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CNR1P21554 472 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 SOX8P57073 446 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 RPL27P61353 136 aaKnown RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF91Q05481 1191 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 RPL18Q07020 188 aaKnown RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 ACKR1Q16570 336 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 TMEM53Q6P2H8 277 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF322Q6U7Q0 402 aaPredicted RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 ARSKQ6UWY0 536 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 TMEM99Q8N816 258 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 PAPD5Q8NDF8 572 aaKnown RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 OR4F15Q8NGB8 312 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 HRASLS5Q96KN8 279 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 RBM7Q9Y580 266 aaKnown RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 A0A087WUJ7 227 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 SMIM30A4D0T7 59 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 CCDC182A6NF36 153 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 CSTBP04080 98 aaKnown RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 GRK5P34947 590 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 MLF1P58340 268 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 PCBD1P61457 104 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 PYDC2Q56P42 97 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF691Q5VV52 312 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 FAM198BQ6UWH4 519 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ASB18Q6ZVZ8 466 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF367Q7RTV3 350 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 FTMTQ8N4E7 242 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF511Q8NB15 262 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ROBO4Q8WZ75 1007 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 THRSPQ92748 146 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 DIRAS2Q96HU8 199 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 FRMD6Q96NE9 622 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 FN3KQ9H479 309 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 MED29Q9NX70 200 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 COMMD3Q9UBI1 195 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 A4GNTQ9UNA3 340 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 GGT3PA6NGU5 568 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 IGFBP1P08833 259 aaPredicted RBP9.17□□□□□ -0.94
SMG6-213ENST00000573166 RAB40BQ12829 278 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 CDC20Q12834 499 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 PRSS53Q2L4Q9 553 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 BORAQ6PGQ7 559 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 ZNF620Q6ZNG0 422 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 PRSS48Q7RTY5 328 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 PM20D2Q8IYS1 436 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 ZNF615Q8N8J6 731 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SLC37A3Q8NCC5 494 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 PARD6AQ9NPB6 346 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 DHDHQ9UQ10 334 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 GBF1Q92538 1859 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 A0A0B4J2E0 115 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 A0A1B0GX12 115 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 S100A1P23297 94 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SRD5A2P31213 254 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
SMG6-213ENST00000573166 TPTEP56180 551 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 NFATC3Q12968 1075 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 C6orf183Q5T699 404 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 BCL2L15Q5TBC7 163 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 DESI1Q6ICB0 168 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 OR7E24Q6IFN5 339 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 DPY19L4Q7Z388 723 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 CPT1CQ8TCG5 803 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 C7orf34Q96L11 122 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 ZNF700Q9H0M5 742 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SEC14L4Q9UDX3 406 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SLC22A20A6NK97 555 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 A6NLC8 198 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 C1QCP02747 245 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SDC2P34741 201 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 EFNA3P52797 238 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 MYBPHQ13203 477 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 FCRLAQ7L513 359 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 LRRC17Q8N6Y2 441 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SPRYD4Q8WW59 207 aaPredicted RBP9.17□□□□□ -0.94
SMG6-213ENST00000573166 KTI12Q96EK9 354 aaPredicted RBP9.17□□□□□ -0.94
SMG6-213ENST00000573166 B3GNT4Q9C0J1 378 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 DCSTAMPQ9H295 470 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 SLC6A15Q9H2J7 730 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 RASD1Q9Y272 281 aa9.17□□□□□ -0.94
SMG6-213ENST00000573166 C9orf172C9J069 976 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 ZNF593O00488 134 aaPredicted RBP9.16□□□□□ -0.94
SMG6-213ENST00000573166 CD96P40200 585 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 PPP2R2BQ00005 443 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 NDUFA5Q16718 116 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 DDI2Q5TDH0 399 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SLX4IPQ5VYV7 408 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 USP43Q70EL4 1123 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 CEACAM19Q7Z692 300 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 VOPP1Q96AW1 172 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 HDHD5Q9BXW7 423 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 AICDAQ9GZX7 198 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 SLC22A11Q9NSA0 550 aa9.16□□□□□ -0.94
SMG6-213ENST00000573166 KIF26AQ9ULI4 1882 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms