RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 H2AFB1P0C5Y9 115 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 UCHL3P15374 230 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 C21orf33P30042 268 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 LEPP41159 167 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 FOLR3P41439 243 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 OMPP47874 163 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CRISP1P54107 249 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 INHBCP55103 352 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4D2P58180 307 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PSME3P61289 254 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 ARL6IP1Q15041 203 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 SPA17Q15506 151 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC9A3R2Q15599 337 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 UBE2V2Q15819 145 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 NDUFA9Q16795 377 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 MSMPQ1L6U9 139 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PRTGQ2VWP7 1150 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 TRMT5Q32P41 509 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 HES5Q5TA89 166 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 DUPD1Q68J44 220 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PNCKQ6P2M8 343 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 SHC4Q6S5L8 630 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CYS1Q717R9 158 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CMC1Q7Z7K0 106 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 LHFPL3Q86UP9 236 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 ZDHHC13Q8IUH4 622 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PRSS58Q8IYP2 241 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 DNAJC22Q8N4W6 341 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 MS4A15Q8N5U1 240 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PXT1Q8NFP0 134 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 OR51A7Q8NH64 312 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 BLOC1S5Q8TDH9 187 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PHLDA1Q8WV24 401 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 MRPL24Q96A35 216 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 TADA1Q96BN2 335 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CAPNS2Q96L46 248 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 CPXM1Q96SM3 734 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 MFSD1Q9H3U5 465 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 GAREM1Q9H706 876 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 SEC61A2Q9H9S3 476 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 TMBIM4Q9HC24 238 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 FGF20Q9NP95 211 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM9Q9P0T7 183 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 RCL1Q9Y2P8 373 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 EXOSC1Q9Y3B2 195 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 OARD1Q9Y530 152 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 IRAK3Q9Y616 596 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 PBRM1Q86U86 1689 aa4.38□□□□□ -1.71
TOPBP1-210ENST00000572787 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 A0A0A6YYD5 115 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF729A6NN14 1252 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PLPP1O14494 284 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 INPP4BO15327 924 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 NDUFA2O43678 99 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 CTNSO60931 367 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 NCR1O76036 304 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 KRT75O95678 551 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ESRRBO95718 433 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TACSTD2P09758 323 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF35P13682 527 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ATP5A1P25705 553 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 DDOSTP39656 456 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 CAV2P51636 162 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TAS2R60P59551 318 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 HOXA4Q00056 320 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TLE4Q04727 773 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 RAB40BQ12829 278 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 DLG1Q12959 904 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 MLLT11Q13015 90 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 GNMTQ14749 295 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 GPNMBQ14956 572 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TAL2Q16559 108 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 BEAN1Q3B7T3 259 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF658BQ4V348 819 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 EIPR1Q53HC9 387 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 DCAF12Q5T6F0 453 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 HACD4Q5VWC8 232 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 MEDAGQ5VYS4 303 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 NIPAL1Q6NVV3 410 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 FAHD2BQ6P2I3 314 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 RAD9BQ6WBX8 426 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF836Q6ZNA1 936 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PTF1AQ7RTS3 328 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TMED4Q7Z7H5 227 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PUSL1Q8N0Z8 303 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 STK40Q8N2I9 435 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 C12orf29Q8N999 325 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC16A11Q8NCK7 471 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 VN1R2Q8NFZ6 395 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OR9A4Q8NGU2 314 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OR52N5Q8NH56 324 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OR5K2Q8NHB8 316 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ACTRT1Q8TDG2 376 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 SETD7Q8WTS6 366 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms