RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ANKRD27Q96NW4 1050 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 DOK1Q99704 481 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 SPATA5L1Q9BVQ7 753 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 ZNF224Q9NZL3 707 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 TESQ9UGI8 421 aaKnown RBP15.69■□□□□ 0.1
CHD3-214ENST00000572579 IGHV2OR16-5A0A0B4J2B6 119 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 SLC35F4A4IF30 521 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 PLPP3O14495 311 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 HLA-HP01893 362 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 CRYAAP02489 173 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 USF1P22415 310 aaPredicted RBP15.68■□□□□ 0.1
CHD3-214ENST00000572579 IDH3GP51553 393 aaPredicted RBP15.68■□□□□ 0.1
CHD3-214ENST00000572579 SH3BGRP55822 239 aaPredicted RBP15.68■□□□□ 0.1
CHD3-214ENST00000572579 C5orf46Q6UWT4 87 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 GPR137CQ8N3F9 429 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 ARIH2OSQ8N7S6 290 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 STON2Q8WXE9 905 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 CGREF1Q99674 301 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 TMEM27Q9HBJ8 222 aa15.68■□□□□ 0.1
CHD3-214ENST00000572579 MRPL39Q9NYK5 338 aaKnown RBP15.68■□□□□ 0.1
CHD3-214ENST00000572579 FBN3Q75N90 2809 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 YLPM1P49750 1951 aaKnown RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 IGHV4-61A0A0C4DH41 118 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 PRORSD1PA6NEY8 169 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 ZNF99A8MXY4 864 aaPredicted RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 EVPLLA8MZ36 301 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 B9A039 149 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 CD247P20963 164 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 GTF2E2P29084 291 aaKnown RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 NR4A2P43354 598 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 DHDDSQ86SQ9 333 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 UEVLDQ8IX04 471 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 SCAIQ8N9R8 606 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 PIK3C3Q8NEB9 887 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 NUP37Q8NFH4 326 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 TAMM41Q96BW9 452 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 ZNF607Q96SK3 696 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 MCHR1Q99705 422 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 SOX7Q9BT81 388 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 TMEM43Q9BTV4 400 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 KAT8Q9H7Z6 458 aaKnown RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 INTS9Q9NV88 658 aaKnown RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 LEF1Q9UJU2 399 aaPredicted RBP15.67■□□□□ 0.1
CHD3-214ENST00000572579 CORINQ9Y5Q5 1042 aa15.67■□□□□ 0.1
CHD3-214ENST00000572579 FBP2O00757 339 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 SERPINB7O75635 380 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 BMP4P12644 408 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 SNRPD2P62316 118 aaKnown RBP15.66■□□□□ 0.1
CHD3-214ENST00000572579 LSM11P83369 360 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHD3-214ENST00000572579 IL1RL1Q01638 556 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 POU3F1Q03052 451 aaPredicted RBP15.66■□□□□ 0.1
CHD3-214ENST00000572579 PMS2P3Q13401 168 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 CAMK2DQ13557 499 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 ZNF627Q7L945 461 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 LRRC17Q8N6Y2 441 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 C11orf65Q8NCR3 313 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 OR4F15Q8NGB8 312 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 SPATA3Q8NHX4 192 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 FGFBP3Q8TAT2 258 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 RNF217Q8TC41 542 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 LRR1Q96L50 414 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 MAGEB18Q96M61 343 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 VRK1Q99986 396 aaPredicted RBP15.66■□□□□ 0.1
CHD3-214ENST00000572579 TAS2R5Q9NYW4 299 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 CORO2BQ9UQ03 480 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 NDUFAF1Q9Y375 327 aa15.66■□□□□ 0.1
CHD3-214ENST00000572579 FMO6PO60774 539 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 PDE5AO76074 875 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 NQO1P15559 274 aaKnown RBP15.65■□□□□ 0.1
CHD3-214ENST00000572579 ZNF16P17020 682 aaPredicted RBP15.65■□□□□ 0.1
CHD3-214ENST00000572579 PAX7P23759 505 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 ARR3P36575 388 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 PDLIM4P50479 330 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 PUDPQ08623 228 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 NPRL3Q12980 569 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 CHRFAM7AQ494W8 412 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 ENTPD8Q5MY95 495 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 CYB5R2Q6BCY4 276 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 ZNF613Q6PF04 617 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 SLC46A3Q7Z3Q1 461 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 PXKQ7Z7A4 578 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 SVOPLQ8N434 492 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 DYDC1Q8WWB3 177 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 ZNF442Q9H7R0 627 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 NPHS2Q9NP85 383 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 ANGPT4Q9Y264 503 aa15.65■□□□□ 0.1
CHD3-214ENST00000572579 CPSF4LA6NMK7 179 aaKnown RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 EDF1O60869 148 aaKnown RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 SASH3O75995 380 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 C8BP07358 591 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 CSF3P09919 207 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 PATE4P0C8F1 98 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 ZNF35P13682 527 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 ZNF14P17017 642 aaPredicted RBP15.64■□□□□ 0.09
CHD3-214ENST00000572579 PIGFQ07326 219 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 RBBP4Q09028 425 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 GGTLC2Q14390 218 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 MFSD13AQ14CX5 517 aa15.64■□□□□ 0.09
CHD3-214ENST00000572579 ZNF74Q16587 644 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms