RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 PDHA2P29803 388 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 DCTP40126 519 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 NBL1P41271 181 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 RND3P61587 244 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 VLDLRP98155 873 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 PAX2Q02962 417 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 PUDPQ08623 228 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SF3A2Q15428 464 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 VAMP3Q15836 100 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CYP51A1Q16850 503 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 NDUFAF6Q330K2 333 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CNPY1Q3B7I2 92 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 KIAA1644Q3SXP7 199 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF672Q499Z4 452 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 FAM120AOSQ5T036 256 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 DCST2Q5T1A1 773 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OR2G6Q5TZ20 316 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF691Q5VV52 312 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MEDAGQ5VYS4 303 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 RNLSQ5VYX0 342 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF57Q68EA5 555 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ANKRD26P1Q6NSI1 321 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF621Q6ZSS3 439 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC26A9Q7LBE3 791 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ARCQ7LC44 396 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF546Q86UE3 836 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC26A11Q86WA9 606 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 APOBEC3FQ8IUX4 373 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 PRR22Q8IZ63 422 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC7A5P1Q8MH63 180 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 METTL4Q8N3J2 472 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 LIX1Q8N485 282 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CYB561A3Q8NBI2 242 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OR9A4Q8NGU2 314 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OR2G2Q8NGZ5 317 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF564Q8TBZ8 553 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SETD7Q8WTS6 366 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 HTR3CQ8WXA8 447 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 GTF2H4Q92759 462 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 NEIL2Q969S2 332 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 CMTM7Q96FZ5 175 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF514Q96K75 400 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OXGR1Q96P68 337 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MS4A4EQ96PG1 132 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OR8B4Q96RC9 309 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 C1orf198Q9H425 327 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 TUBB1Q9H4B7 451 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 VCX3AQ9NNX9 186 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 ACP6Q9NPH0 428 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 B3GAT2Q9NPZ5 323 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 OR2S2Q9NQN1 319 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SDHAF3Q9NRP4 125 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 HRASLS2Q9NWW9 162 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 NKIRAS1Q9NYS0 192 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 HMGXB4Q9UGU5 601 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MRM2Q9UI43 246 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 MMP17Q9ULZ9 603 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SCML1Q9UN30 329 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 RPL36Q9Y3U8 105 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 V9GYY9 64 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 VWDEQ8N2E2 1590 aa2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 XIRP1Q702N8 1843 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-211ENST00000566550 SBNO1A3KN83 1393 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 IGHV4-4A0A075B6R2 117 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 A0A0G2JLW4 131 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PP2D1A8MPX8 630 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 G3V2L1 256 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 SULT2B1O00204 365 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 DYNC1I1O14576 645 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC9A3R1O14745 358 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ZW10O43264 779 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 SNAI2O43623 268 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PCDH7O60245 1069 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 EIF4E2O60573 245 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RAMP1O60894 148 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CD160O95971 181 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 PAK4O96013 591 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 TCN1P20061 433 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 MARK3P27448 753 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 IL12AP29459 219 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RBM34P42696 430 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 KCNJ3P48549 501 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 CDC34P49427 236 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RAB7AP51149 207 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ATP4BP51164 291 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ATP12AP54707 1039 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 UCNP55089 124 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 STX17P56962 302 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 OR2B6P58173 313 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 MLF1P58340 268 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 RPS14P62263 151 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACTA2P62736 377 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACTG2P63267 376 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACTC1P68032 377 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 ACTA1P68133 377 aa2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 BASP1P80723 227 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-211ENST00000566550 GNMTQ14749 295 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms