RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 KIF18BQ86Y91 864 aa13.18□□□□□ -0.3
SPG7-213ENST00000566221 C9orf106Q8NAJ2 232 aa13.18□□□□□ -0.3
SPG7-213ENST00000566221 GMPPAQ96IJ6 420 aaPredicted RBP13.18□□□□□ -0.3
SPG7-213ENST00000566221 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
SPG7-213ENST00000566221 EGLN3Q9H6Z9 239 aa13.18□□□□□ -0.3
SPG7-213ENST00000566221 IL20Q9NYY1 176 aa13.18□□□□□ -0.3
SPG7-213ENST00000566221 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 H3BN98 237 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 TRAF3IP2O43734 574 aaPredicted RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 IL2RAP01589 272 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 IGHMP01871 453 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 F13BP05160 661 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 PER3P56645 1201 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 ESRRGP62508 458 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 THSD4Q6ZMP0 1018 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 KDM8Q8N371 416 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 RPRMLQ8N4K4 120 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 SAMD8Q96LT4 415 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 TTYH2Q9BSA4 534 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 POLDIP3Q9BY77 421 aaKnown RBP13.17□□□□□ -0.3
SPG7-213ENST00000566221 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 BCO1Q9HAY6 547 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 FLVCR1Q9Y5Y0 555 aa13.17□□□□□ -0.3
SPG7-213ENST00000566221 SS18L1O75177 396 aaPredicted RBP13.16□□□□□ -0.3
SPG7-213ENST00000566221 SERPINI2O75830 405 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 CRHP06850 196 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 YES1P07947 543 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 CD14P08571 375 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 GLI4P10075 376 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 HLA-DOBP13765 273 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 GNLYP22749 145 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 AGTR1P30556 359 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 CTXN1P60606 82 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 RIPPLY2Q5TAB7 128 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 TTC23Q5W5X9 447 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 SEM1Q6ZVN7 128 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 IGFN1Q86VF2 1251 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 GCNT2Q8N0V5 402 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 DHRSXQ8N5I4 330 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 OR2T33Q8NG76 320 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 OR8D4Q8NGM9 314 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 DMRTA2Q96SC8 542 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 KATNB1Q9BVA0 655 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 IL20RAQ9UHF4 553 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
SPG7-213ENST00000566221 BAIAP2Q9UQB8 552 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 EMC9Q9Y3B6 208 aa13.16□□□□□ -0.3
SPG7-213ENST00000566221 DLGAP1O14490 977 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 TMIGD3P0DMS9 266 aaPredicted RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 APEHP13798 732 aaKnown RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 IFNGR1P15260 489 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 POU1F1P28069 291 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 CEACAM8P31997 349 aaPredicted RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 UQCRFS1P47985 274 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 CRISP1P54107 249 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 TOP3AQ13472 1001 aaPredicted RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 IL18R1Q13478 541 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 GUSBP1Q15486 140 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 ACKR1Q16570 336 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 CLEC12AQ5QGZ9 265 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 FAM205BPQ63HN1 556 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 TUSC5Q8IXB3 177 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 MARVELD2Q8N4S9 558 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 ZNF555Q8NEP9 628 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 INTS12Q96CB8 462 aaKnown RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
SPG7-213ENST00000566221 ZNF570Q96NI8 536 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 ADI1Q9BV57 179 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 TSSK6Q9BXA6 273 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 ENKD1Q9H0I2 346 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 RIBC2Q9H4K1 309 aa13.15□□□□□ -0.3
SPG7-213ENST00000566221 SLC25A19Q9HC21 320 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms