RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TMEM39BQ9GZU3 492 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 TMEM27Q9HBJ8 222 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 HRASLSQ9HDD0 168 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SEMA4GQ9NTN9 838 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 DCAF13Q9NV06 445 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 ZNF701Q9NV72 531 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 MCUBQ9NWR8 336 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 RMND1Q9NWS8 449 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 ZNF446Q9NWS9 450 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 ZNF490Q9ULM2 529 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 YARS2Q9Y2Z4 477 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 RBM7Q9Y580 266 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 LOC102724200A0A096LPH7 203 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 A0A0G2JNJ9 132 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 TMEM202A6NGA9 273 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 F5H768 121 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 G3V4G9 280 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 LEFTY2O00292 366 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 CYP26A1O43174 497 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SHOX2O60902 331 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 MELTFP08582 738 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 CSRP1P21291 193 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 FDXRP22570 491 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 IGFBP5P24593 272 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 COL8A1P27658 744 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 C21orf33P30042 268 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 CNR2P34972 360 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 NOVA1P51513 510 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 IDH3GP51553 393 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 DLX5P56178 289 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 NXPH1P58417 271 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SLAMF1Q13291 335 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 MELKQ14680 651 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 PSMD5Q16401 504 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 C2orf68Q2NKX9 166 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 TEX30Q5JUR7 227 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 LY6G6FQ5SQ64 297 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 N4BP2L1Q5TBK1 243 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 MARC1Q5VT66 337 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 AGAP6Q5VW22 663 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 FAM90A2PQ658T7 463 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 FAM45BPQ6NSW5 357 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 EFCAB12Q6NXP0 572 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 MON1BQ7L1V2 547 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 APTXQ7Z2E3 356 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 PEX26Q7Z412 305 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 LHFPL3Q86UP9 236 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 CALHM1Q8IU99 346 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 LACC1Q8IV20 430 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SPATA6LQ8N4H0 392 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 JAGN1Q8N5M9 183 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 OR4D5Q8NGN0 318 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 OR9A2Q8NGT5 310 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 OR6X1Q8NH79 312 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 LGALS14Q8TCE9 139 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 CCDC107Q8WV48 283 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SSMEM1Q8WWF3 244 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 ATG4AQ8WYN0 398 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 RAB8BQ92930 207 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 NACC1Q96RE7 527 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 RASL10BQ96S79 203 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 KLF6Q99612 283 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 NKX3-1Q99801 234 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 ZSWIM1Q9BR11 485 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 NICN1Q9BSH3 213 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 WWTR1Q9GZV5 400 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 MFSD1Q9H3U5 465 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 PPP1R3EQ9H7J1 279 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 SFXN1Q9H9B4 322 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 POPDC2Q9HBU9 364 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 C6orf50Q9HD87 102 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 FAM206AQ9NX38 181 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 DUS2Q9NX74 493 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 NLGN3Q9NZ94 848 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 Q9UFV3 132 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 FZR1Q9UM11 496 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 MGAT4AQ9UM21 535 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 DIMT1Q9UNQ2 313 aaKnown RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 SPIN1Q9Y657 262 aaPredicted RBP2.78□□□□□ -1.96
CHD9-216ENST00000565803 STYXL1Q9Y6J8 313 aa2.78□□□□□ -1.96
CHD9-216ENST00000565803 FAM92AA1XBS5 289 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 NPIPB6E9PJ23 425 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 F8VVB4 439 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 F8VWA3 439 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 RNASEK-C17orf49H0YIS7 233 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 MKRN2OSH3BPM6 223 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CYB561D2O14569 222 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 EPHB6O15197 1021 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 XPNPEP2O43895 674 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 PDE6DO43924 150 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 KIAA0513O60268 411 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 CTNSO60931 367 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 DUSP11O75319 330 aaKnown RBP2.78□□□□□ -1.97
CHD9-216ENST00000565803 BCAR3O75815 825 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 TRAPPC6AO75865 159 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 STC2O76061 302 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 SOX30O94993 753 aa2.78□□□□□ -1.97
CHD9-216ENST00000565803 FGF19O95750 216 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms