RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RASSF5Q8WWW0 418 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 RCN3Q96D15 328 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 TXNDC15Q96J42 360 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 HS6ST2Q96MM7 605 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF583Q96ND8 569 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 SLC38A2Q96QD8 506 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 SEC61A2Q9H9S3 476 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 CRLF2Q9HC73 371 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 CBLN4Q9NTU7 201 aa17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 NSD1Q96L73 2696 aaPredicted RBP17.42■□□□□ 0.38
SHCBP1-203ENST00000564272 FAM171A2A8MVW0 826 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 SEC14L2O76054 403 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 MT-ATP6P00846 226 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 NPPAP01160 153 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 AHCYP23526 432 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 MDH1P40925 334 aaKnown RBP17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 ETFDHQ16134 617 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF74Q16587 644 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 TTC33Q6PID6 262 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 CARM1Q86X55 608 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 PCYOX1LQ8NBM8 494 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 OR5J2Q8NH18 312 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 MAGEE2Q8TD90 523 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 PROX1Q92786 737 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF317Q96PQ6 595 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 PCDHAC1Q9H158 963 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 GID8Q9NWU2 228 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 SH3GLB1Q9Y371 365 aa17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 NIPBLQ6KC79 2804 aaeCLIP17.41■□□□□ 0.38
SHCBP1-203ENST00000564272 ALPK2Q86TB3 2170 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 TLN2Q9Y4G6 2542 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 SLC35F4A4IF30 521 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF503-AS2A6NEH8 195 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 FAM220BPB1ANY3 271 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 C11orf98E9PRG8 122 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 SHOX2O60902 331 aaPredicted RBP17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 CH25HO95992 272 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 LRRC23Q53EV4 343 aaPredicted RBP17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF544Q6NX49 715 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ERICH5Q6P6B1 374 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 NHLRC1Q6VVB1 395 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 DEF8Q6ZN54 512 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 C20orf196Q8IYI0 205 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 MAPK1IP1LQ8NDC0 245 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ANKK1Q8NFD2 765 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 HTRA1Q92743 480 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ZNF426Q9BUY5 554 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 NOX1Q9Y5S8 564 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 NAV3Q8IVL0 2385 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 ZANQ9Y493 2812 aa17.4■□□□□ 0.38
SHCBP1-203ENST00000564272 CSPG4Q6UVK1 2322 aa17.39■□□□□ 0.38
SHCBP1-203ENST00000564272 FN1P02751 2386 aaKnown RBP17.39■□□□□ 0.38
SHCBP1-203ENST00000564272 RNF223E7ERA6 249 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 SLC22A2O15244 555 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 CECR9P0C854 216 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 ADORA3P0DMS8 318 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 CAMK2DQ13557 499 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 PXKQ7Z7A4 578 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 MYPOPQ86VE0 399 aaPredicted RBP17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 LRRC17Q8N6Y2 441 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 MPP4Q96JB8 637 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 ADAD1Q96M93 576 aaKnown RBP17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 PRSS27Q9BQR3 290 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 BARX1Q9HBU1 254 aaPredicted RBP17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 GMPR2Q9P2T1 348 aaKnown RBP17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 CRNNQ9UBG3 495 aaPredicted RBP17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 BAG5Q9UL15 447 aa17.39■□□□□ 0.37
SHCBP1-203ENST00000564272 ZNF99A8MXY4 864 aaPredicted RBP17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 IGLV1-44P01699 117 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 CELA3BP08861 270 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 NAAAQ02083 359 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 CYBRD1Q53TN4 286 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 OR2T12Q8NG77 320 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 KCNS3Q9BQ31 491 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 KATNB1Q9BVA0 655 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 CMTM6Q9NX76 183 aa17.38■□□□□ 0.37
SHCBP1-203ENST00000564272 ZNF726A6NNF4 738 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 SSX4O60224 188 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 OR6A2O95222 327 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 HOXB1P14653 301 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 IFNGR1P15260 489 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 CALCRP30988 508 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 APOBEC3AP31941 199 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 CAPZA2P47755 286 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 OR1E2P47887 323 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 NUDT6P53370 316 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 BIDP55957 195 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 TAS2R41P59536 307 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 DNM1P46Q6ZS02 220 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 SLC46A3Q7Z3Q1 461 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 NKAIN4Q8IVV8 208 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 MICU2Q8IYU8 434 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 OR6N1Q8NGY5 312 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 LRR1Q96L50 414 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 ULBP2Q9BZM5 246 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 SLC19A3Q9BZV2 496 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 B3GAT2Q9NPZ5 323 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 MEPEQ9NQ76 525 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 NANSQ9NR45 359 aa17.37■□□□□ 0.37
SHCBP1-203ENST00000564272 TAS2R5Q9NYW4 299 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms