RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 C1orf216Q8TAB5 229 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 ZNF480Q8WV37 535 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 DNASE2BQ8WZ79 361 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 NEIL2Q969S2 332 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SGK3Q96BR1 496 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 FAM46AQ96IP4 442 aaKnown RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 ART5Q96L15 291 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 MS4A4EQ96PG1 132 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SIRT3Q9NTG7 399 aaPredicted RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 TAS2R10Q9NYW0 307 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 CNIH4Q9P003 139 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 OR6C68A6NDL8 312 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 E9PI62 339 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 GOSR2O14653 212 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 BCL2L11O43521 198 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 RDH16O75452 317 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 OR2F2O95006 317 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 CH25HO95992 272 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 IGHV2-70P01814 119 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 VSIG10L2P0DP72 767 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 HTR2AP28223 471 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 AFF3P51826 1226 aaKnown RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 MANFP55145 182 aaKnown RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 TAS2R41P59536 307 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 TBPL1P62380 186 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 UBE2IP63279 158 aaKnown RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 ST3GAL3Q11203 375 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 OR2F1Q13607 317 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SLBPQ14493 270 aaKnown RBP eCLIP10.13□□□□□ -0.79
TCF4-222ENST00000564228 RPE65Q16518 533 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SYPL1Q16563 259 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 Q3ZCU0 254 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 RNF212Q495C1 297 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 ZNF311Q5JNZ3 666 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 ZNF613Q6PF04 617 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 DNM1P46Q6ZS02 220 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 USP53Q70EK8 1073 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 JAZF1Q86VZ6 243 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SUN3Q8TAQ9 357 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 GPBAR1Q8TDU6 330 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 DIO2Q92813 273 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SLC35G5Q96KT7 338 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 ARHGDIGQ99819 225 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 CRB3Q9BUF7 120 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 LRRC61Q9BV99 259 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 TINAGL1Q9GZM7 467 aaPredicted RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 PRDM9Q9NQV7 894 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 SEMA4GQ9NTN9 838 aa10.13□□□□□ -0.79
TCF4-222ENST00000564228 ACSS1Q9NUB1 689 aaPredicted RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 ZNF629Q9UEG4 869 aaPredicted RBP10.13□□□□□ -0.79
TCF4-222ENST00000564228 A0A0B4J203 849 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 KANTRA0A1W2PQU2 76 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 SLC22A31A6NKX4 558 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PYCARD-AS1I3L0S3 204 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 B4GALT2O60909 372 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 FBP1P09467 338 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 RAB40ALP0C0E4 278 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 C1GALT1C1LP0DN25 315 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 NR2F1P10589 423 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 F3P13726 295 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PRF1P14222 555 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PTGFRP43088 359 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 ANXA11P50995 505 aaKnown RBP10.12□□□□□ -0.79
TCF4-222ENST00000564228 ARHGDIBP52566 201 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PCBP4P57723 403 aaKnown RBP10.12□□□□□ -0.79
TCF4-222ENST00000564228 ACTC1P68032 377 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 ACTA1P68133 377 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 MLC1Q15049 377 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 CSRP2Q16527 193 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 MTFR2Q6P444 385 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 OR2W3Q7Z3T1 314 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 KRT77Q7Z794 578 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 IZUMO1Q8IYV9 350 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 C17orf47Q8NEP4 570 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 RXFP4Q8TDU9 374 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 PATE1Q8WXA2 126 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 RAB40AQ8WXH6 277 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 ACOT11Q8WXI4 607 aaPredicted RBP10.12□□□□□ -0.79
TCF4-222ENST00000564228 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 UBE2E3Q969T4 207 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 XKR8Q9H6D3 395 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 KMT2EQ8IZD2 1858 aa10.12□□□□□ -0.79
TCF4-222ENST00000564228 A0A1B0GVT2 93 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 MEX3AA1L020 520 aaKnown RBP10.11□□□□□ -0.79
TCF4-222ENST00000564228 OR14I1A6ND48 311 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 C5orf52A6NGY3 159 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 OGG1O15527 345 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 TGFB1P01137 390 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 CD8AP01732 235 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 NME1P15531 152 aaKnown RBP10.11□□□□□ -0.79
TCF4-222ENST00000564228 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 PTH2RP49190 550 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 KHKP50053 298 aa10.11□□□□□ -0.79
TCF4-222ENST00000564228 P2RX1P51575 399 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms