RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 FOXF1Q12946 379 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 ACKR1Q16570 336 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 ZNF684Q5T5D7 378 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 AGAP7PQ5VUJ5 663 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 OTPQ5XKR4 325 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 GDPD3Q7L5L3 318 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 SLC16A9Q7RTY1 509 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 STK35Q8TDR2 534 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 TMEM234Q8WY98 164 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 PPP1R14BQ96C90 147 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 SMAD5Q99717 465 aaKnown RBP17.26■□□□□ 0.35
SMPD3-203ENST00000563226 PDCD1LG2Q9BQ51 273 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 ULBP3Q9BZM4 244 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 NDEL1Q9GZM8 345 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 MALT1Q9UDY8 824 aa17.26■□□□□ 0.35
SMPD3-203ENST00000563226 GPN3Q9UHW5 284 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-203ENST00000563226 FTCDNL1E5RQL4 147 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 DXOO77932 396 aaKnown RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 AHSA1O95433 338 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 RENP00797 406 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 PSKH1P11801 424 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 IL7P13232 177 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 NAGAP17050 411 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 INPP5JQ15735 1006 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 BTBD16Q32M84 506 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 EEF1A1P5Q5VTE0 462 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 CNIH2Q6PI25 160 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 DRAXINQ8NBI3 349 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 GALNT6Q8NCL4 622 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 OR2T4Q8NH00 348 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ST8SIA1Q92185 356 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 TTC9Q92623 222 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ARL5BQ96KC2 179 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ARRDC1-AS1Q9H2J1 176 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 WDR76Q9H967 626 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 BDP1A6H8Y1 2624 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 A0A087WV48 116 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 A0A0G2JK05 382 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 TRBV2A0A0J9YWF9 115 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 PLPP3O14495 311 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 AKR7A3O95154 331 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 LDOC1O95751 146 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 MPLP40238 635 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 CD300CQ08708 224 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 IDNKQ5T6J7 187 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 RPL22L1Q6P5R6 122 aaKnown RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 KDM8Q8N371 416 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ZBTB44Q8NCP5 570 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ZNF519Q8TB69 540 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 ELP5Q8TE02 316 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 FOXN4Q96NZ1 517 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 RASL10BQ96S79 203 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 DEFB126Q9BYW3 111 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 CPNE5Q9HCH3 593 aa17.25■□□□□ 0.35
SMPD3-203ENST00000563226 PTRH2Q9Y3E5 179 aaKnown RBP17.25■□□□□ 0.35
SMPD3-203ENST00000563226 LOC102723996A0A087X1L8 192 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 A0A1W2PQ09 198 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 KLF7O75840 302 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 DKK1O94907 266 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 KLK3P07288 261 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 SP9P0CG40 484 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 OR8G3PP0DMU2 310 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 HTR3AP46098 478 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 NANOS3P60323 173 aaKnown RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 HSF2Q03933 536 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 XKRXQ6PP77 449 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 IL20RBQ6UXL0 311 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 CDC20BQ86Y33 519 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 MS4A15Q8N5U1 240 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 HSD17B8Q92506 261 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 PPP4R1LQ9P1A2 415 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 TMCC2O75069 709 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 CSF3P09919 207 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 FBXO45P0C2W1 286 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 HLA-DOBP13765 273 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 TCEA1P23193 301 aaKnown RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 MYL9P24844 172 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 THBS2P35442 1172 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 SUMO3P55854 103 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 RPL27P61353 136 aaKnown RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 MELKQ14680 651 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 HBMQ6B0K9 141 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 SYT9Q86SS6 491 aa17.24■□□□□ 0.35
SMPD3-203ENST00000563226 MRM2Q9UI43 246 aaKnown RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 NXT1Q9UKK6 140 aaKnown RBP17.24■□□□□ 0.35
SMPD3-203ENST00000563226 NCOR1O75376 2440 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 IGHV1-45A0A0A0MS14 117 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 XKRYO14609 159 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 APEX1P27695 318 aaKnown RBP17.23■□□□□ 0.35
SMPD3-203ENST00000563226 CCKBRP32239 447 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 TMED10P49755 219 aaKnown RBP17.23■□□□□ 0.35
SMPD3-203ENST00000563226 DEFA1P59665 94 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 DEFA3P59666 94 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 P2RY14Q15391 338 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 TAB1Q15750 504 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 SPATC1Q76KD6 591 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 OR6N2Q8NGY6 317 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 SLC22A8Q8TCC7 542 aa17.23■□□□□ 0.35
SMPD3-203ENST00000563226 ADAD1Q96M93 576 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms