RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SERPINI2O75830 405 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 PRKAR1BP31321 381 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 CDH15P55291 814 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 GALK2Q01415 458 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 POU3F1Q03052 451 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 PIGFQ07326 219 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 RGNQ15493 299 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SLC2A7Q6PXP3 512 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 UGT2A3Q6UWM9 527 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF813Q6ZN06 617 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 NET1Q7Z628 596 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 TMEM123Q8N131 208 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 C10orf53Q8N6V4 93 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 OR6N1Q8NGY5 312 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 DNAJA4Q8WW22 397 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SYT3Q9BQG1 590 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 EMC6Q9BV81 110 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 ASPNQ9BXN1 380 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 MRPL37Q9BZE1 423 aaKnown RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 NARFLQ9H6Q4 476 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 C12orf10Q9HB07 376 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 BCL2L10Q9HD36 194 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SDR39U1Q9NRG7 319 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-202ENST00000562722 REV1Q9UBZ9 1251 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 SLC13A4Q9UKG4 626 aa11.21□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF726A6NNF4 738 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 TRAF3IP2O43734 574 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 SYNGR3O43761 229 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 RAB36O95755 333 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 B4GALT1P15291 398 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 TCN1P20061 433 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 NR4A1P22736 598 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 HTR2AP28223 471 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 LSP1P33241 339 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 GPR6P46095 362 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 FADDQ13158 208 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 RIN1Q13671 783 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 MFSD13AQ14CX5 517 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 PHYHD1Q5SRE7 291 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 GCNT6Q5T4J0 391 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 ULK3Q6PHR2 472 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 CROCCP2Q86T23 111 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 GLCCI1Q86VQ1 547 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 KRT73Q86Y46 540 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 C20orf196Q8IYI0 205 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 GOLGA6L1Q8N7Z2 621 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 NFKBIDQ8NI38 313 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 MRPL24Q96A35 216 aaKnown RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 MAELQ96JY0 434 aaKnown RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 OR52B2Q96RD2 323 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 EPYCQ99645 322 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 SPATA5L1Q9BVQ7 753 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 PARD6BQ9BYG5 372 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 PAIP1Q9H074 479 aaKnown RBP11.2□□□□□ -0.62
SF3B3-202ENST00000562722 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 MED29Q9NX70 200 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 KLHL14Q9P2G3 628 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 CORINQ9Y5Q5 1042 aa11.2□□□□□ -0.62
SF3B3-202ENST00000562722 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 IGKV1D-42A0A075B6H8 117 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 A0A087WUJ7 227 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 B4DSR2 109 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 HPRP00739 348 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 ETS2P15036 469 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 AHCYP23526 432 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 ALDH3B1P43353 468 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 DVL1P1P54792 670 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-202ENST00000562722 AQP5P55064 265 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 RGS8P57771 180 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-202ENST00000562722 STX1BP61266 288 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 PMS2P3Q13401 168 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 CAMK2DQ13557 499 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
SF3B3-202ENST00000562722 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 LSMEM1Q8N8F7 131 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 ADPRHL1Q8NDY3 354 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 GTF2H4Q92759 462 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 SLC47A1Q96FL8 570 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 MS4A5Q9H3V2 200 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-202ENST00000562722 TMEM27Q9HBJ8 222 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 TESQ9UGI8 421 aaKnown RBP11.19□□□□□ -0.62
SF3B3-202ENST00000562722 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
SF3B3-202ENST00000562722 LOC102725191A0A1B0GVB3 256 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 A0A1W2PPW3 197 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 MS4A18H0YCH9 400 aa11.18□□□□□ -0.62
SF3B3-202ENST00000562722 IGFBP1P08833 259 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-202ENST00000562722 SAGP10523 405 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms