RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MS4A18H0YCH9 400 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 MGRN1O60291 552 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 LYZL6O75951 148 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 GOSR1O95249 250 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ASAH2BP0C7U1 165 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 EPXP11678 715 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ZNF23P17027 643 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 POU1F1P28069 291 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 PCYT1AP49585 367 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 NR1H2P55055 460 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 RPL27P61353 136 aaKnown RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 PLP2Q04941 152 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 RPL18Q07020 188 aaKnown RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 MS4A18Q3C1V0 323 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 C9orf135Q5VTT2 229 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ANKRD34AQ69YU3 496 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 TFAP2EQ6VUC0 442 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 DPY19L2P2Q6ZN68 376 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ZNF771Q7L3S4 317 aaPredicted RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 DMRTC2Q8IXT2 367 aaPredicted RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 LRRC17Q8N6Y2 441 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 FAM86B1Q8N7N1 296 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 AQP11Q8NBQ7 271 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 LINC01560Q8TB33 94 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 DNAJC9Q8WXX5 260 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 LRR1Q96L50 414 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ZNF570Q96NI8 536 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ZNF385AQ96PM9 386 aaKnown RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 TNFRSF13CQ96RJ3 184 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 EMC6Q9BV81 110 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 LINC00470Q9BZP3 86 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 TXNIPQ9H3M7 391 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 ESRP2Q9H6T0 727 aaKnown RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 MEPEQ9NQ76 525 aaPredicted RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 TBC1D23Q9NUY8 699 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 PRSS50Q9UI38 385 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 POU2F3Q9UKI9 436 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 BAIAP2Q9UQB8 552 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
TPM1-229ENST00000561242 DSPP15924 2871 aaKnown RBP9.49□□□□□ -0.89
TPM1-229ENST00000561242 TRAV27A0A087WT01 109 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TRBV4-1A0A0J9YWV2 114 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TCRBV5S2A0A599 114 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CENPBD1B2RD01 187 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 G3V2T6 193 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 FFAR1O14842 300 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ARHGEF9O43307 516 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 PIP5K1CO60331 668 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TIPRLO75663 272 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 RAD51DO75771 328 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 PTHP01270 115 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CD14P08571 375 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 HOXB1P14653 301 aaPredicted RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 ACADSP16219 412 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 PSMB1P20618 241 aaKnown RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 PAICSP22234 425 aaKnown RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 FPR3P25089 353 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 SELENOPP49908 381 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TSPAN31Q12999 210 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 PPA1Q15181 289 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ACKR1Q16570 336 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 THEM4Q5T1C6 240 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TSPO2Q5TGU0 170 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ANKRD16Q6P6B7 361 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 CLEC18BQ6UXF7 455 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 WDR88Q6ZMY6 472 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 EPHX4Q8IUS5 362 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ADGRG5Q8IZF4 528 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 SVOPLQ8N434 492 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 C17orf78Q8N4C9 275 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ICA1LQ8NDH6 482 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 OR13C2Q8NGS9 318 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 OR5K1Q8NHB7 308 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 LIPHQ8WWY8 451 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 NRBF2Q96F24 287 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 ERMAPQ96PL5 475 aaPredicted RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 ZNF426Q9BUY5 554 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CDADC1Q9BWV3 514 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 SEC61A2Q9H9S3 476 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CRLF2Q9HC73 371 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 CCNB1IP1Q9NPC3 277 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 OBP2BQ9NPH6 170 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 C20orf141Q9NUB4 165 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 MED29Q9NX70 200 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 TAS2R5Q9NYW4 299 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 GLTPQ9NZD2 209 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 H2AFY2Q9P0M6 372 aaPredicted RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 HIF3AQ9Y2N7 669 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 POLR1DQ9Y2S0 133 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 SPEF1Q9Y4P9 236 aa9.48□□□□□ -0.89
TPM1-229ENST00000561242 KMT2BQ9UMN6 2715 aaPredicted RBP9.48□□□□□ -0.89
TPM1-229ENST00000561242 ESPL1Q14674 2120 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms