RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RNF148Q8N7C7 305 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 WDR31Q8NA23 367 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR1K1Q8NGR3 316 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 PFN4Q8NHR9 129 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 SMAP2Q8WU79 429 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 GEMIN6Q8WXD5 167 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 PIP5K1AQ99755 562 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 KCNS3Q9BQ31 491 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 PRSS27Q9BQR3 290 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 FNDC11Q9BVV2 318 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 AMBRA1Q9C0C7 1298 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 RHCGQ9UBD6 479 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 EGFL7Q9UHF1 273 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF229Q9UJW7 825 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 MGAT4BQ9UQ53 548 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
CTDSPL2-209ENST00000560620 AKAP9Q99996 3911 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 FZD7O75084 574 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SEC14L2O76054 403 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF432O94892 652 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 THRBP10828 461 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 IFNGR1P15260 489 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 CD40P25942 277 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 RBM34P42696 430 aaKnown RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SH3BGRP55822 239 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 RPS4XP62701 263 aaKnown RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 ARF1P84077 181 aaKnown RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC25A3Q00325 362 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SPOCK1Q08629 439 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 IFI44LQ53G44 452 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 Q5PR19 223 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 C8orf82Q6P1X6 216 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 ANKRD16Q6P6B7 361 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 PIGWQ7Z7B1 504 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 LILRB1Q8NHL6 650 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SGTBQ96EQ0 304 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 HSH2DQ96JZ2 352 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 PRRC1Q96M27 445 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 HS6ST2Q96MM7 605 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 GPR35Q9HC97 309 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 RPS6KA6Q9UK32 745 aa11.36□□□□□ -0.59
CTDSPL2-209ENST00000560620 SHISA9B4DS77 424 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 MCIDASD6RGH6 385 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 FUT1P19526 365 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 CSNK1A1P48729 337 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 UGT2B15P54855 530 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 TUBA1BP68363 451 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 TUBA4AP68366 448 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 MELKQ14680 651 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 GKAP1Q5VSY0 366 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 SHEQ5VZ18 495 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 GLYATQ6IB77 296 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 CBLL1Q75N03 491 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 RRM2BQ7LG56 351 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 CYP4Z1Q86W10 505 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 TMEM123Q8N131 208 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 CCT8L2Q96SF2 557 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF426Q9BUY5 554 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 C20orf141Q9NUB4 165 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 ARL8BQ9NVJ2 186 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 TAS2R5Q9NYW4 299 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 ABCD2Q9UBJ2 740 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 A4GNTQ9UNA3 340 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 POFUT2Q9Y2G5 429 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 SNX13Q9Y5W8 968 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 ATP23Q9Y6H3 246 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 ROS1P08922 2347 aa11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 RAI1Q7Z5J4 1906 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL2-209ENST00000560620 A0A1W2PRG6 482 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 RPL36A-HNRNPH2H7BZ11 118 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 J3KTA2 159 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 PIP5K1CO60331 668 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 OR7A10O76100 309 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 BCL10O95999 233 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 F13BP05160 661 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 SOD3P08294 240 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 ASAH2BP0C7U1 165 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 SAGP10523 405 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 IFI30P13284 250 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 PTH2RP49190 550 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 NPRL3Q12980 569 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 TRAM2Q15035 370 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 PHYHD1Q5SRE7 291 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
CTDSPL2-209ENST00000560620 C16orf89Q6UX73 402 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms