RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CDK20Q8IZL9 346 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 HS3ST5Q8IZT8 346 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 C10orf53Q8N6V4 93 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 POMGNT2Q8NAT1 580 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 FAM222BQ8WU58 562 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 C14orf79Q96F83 325 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 DHRS1Q96LJ7 313 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 RDH12Q96NR8 316 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 PIP5K1AQ99755 562 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 OPN3Q9H1Y3 402 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 C12orf49Q9H741 205 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 NMNAT1Q9HAN9 279 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 NOX1Q9Y5S8 564 aa12.4□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 H0YAE9 185 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 C19orf84I3L1E1 186 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 FFAR1O14842 300 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 OR6A2O95222 327 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 H1F0P07305 194 aaKnown RBP12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 ASAH2BP0C7U1 165 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 UGT2B10P36537 528 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 ITGADQ13349 1161 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 FBXW9Q5XUX1 488 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 ANKRD34AQ69YU3 496 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 NUFIP2Q7Z417 695 aaKnown RBP12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 HDDC2Q7Z4H3 204 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 NKAIN4Q8IVV8 208 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 UEVLDQ8IX04 471 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 NRBF2Q96F24 287 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 RBM4BQ9BQ04 359 aaKnown RBP12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 RBM4Q9BWF3 364 aaKnown RBP12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF696Q9H7X3 374 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 MAN2C1Q9NTJ4 1040 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
PKNOX1-209ENST00000560448 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 ENO4A6NNW6 628 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 RAMP1O60894 148 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 DIRAS1O95057 198 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 CH25HO95992 272 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 GNAO1P09471 354 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 SMIM18P0DKX4 95 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 KLK2P20151 261 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 PAX7P23759 505 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 SSTR2P30874 369 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 DNAJA1P31689 397 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 SLC9A3P48764 834 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 PPP1R8Q12972 351 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 C1DQ13901 141 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 CASP12Q6UXS9 341 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF730Q6ZMV8 503 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 AAED1Q7RTV5 226 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 P2RY8Q86VZ1 359 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 LINC00471Q8N535 108 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 SGTBQ96EQ0 304 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 DNAJA3Q96EY1 480 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 MOGAT1Q96PD6 335 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 MBOAT4Q96T53 435 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 NDEL1Q9GZM8 345 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 ASB6Q9NWX5 421 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 B3GAT1Q9P2W7 334 aa12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 FLNBO75369 2602 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-209ENST00000560448 NPIPB13A6NJU9 1138 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 NPIPB4C9JG80 1138 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 PLPP3O14495 311 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 E2F6O75461 281 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 OR7A10O76100 309 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 EPXP11678 715 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 COX5AP20674 150 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 PRKACGP22612 351 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 IFNGR2P38484 337 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 UGT2B15P54855 530 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 PRKCDQ05655 676 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 LTBQ06643 244 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SFRP5Q5T4F7 317 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 OR7E24Q6IFN5 339 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 STAC2Q6ZMT1 411 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 MBOAT2Q6ZWT7 520 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 ZNF226Q9NYT6 803 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 TAS2R16Q9NYV7 291 aa12.37□□□□□ -0.43
PKNOX1-209ENST00000560448 U3KQV3 271 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms