RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 DEPDC4Q8N2C3 294 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 GTPBP3Q969Y2 492 aaKnown RBP18.25■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF845Q96IR2 970 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-225ENST00000560005 HRASLS5Q96KN8 279 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 NIPSNAP1Q9BPW8 284 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 PRR14Q9BWN1 585 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 YAE1D1Q9NRH1 226 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 FBXL2Q9UKC9 423 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 MED31Q9Y3C7 131 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 GMPPBQ9Y5P6 360 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 CR1P17927 2039 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 A0A1B0GWA3 101 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 PHF1O43189 567 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-225ENST00000560005 F12P00748 615 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-225ENST00000560005 PLAUP00749 431 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 SRD5A2P31213 254 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 P2RX1P51575 399 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 CRISP1P54107 249 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 PLAURQ03405 335 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 TSPAN31Q12999 210 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 CBFBQ13951 182 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 BEX5Q5H9J7 111 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 ALG10BQ5I7T1 473 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 TTC33Q6PID6 262 aaPredicted RBP18.24■□□□□ 0.51
PSEN1-225ENST00000560005 APOOLQ6UXV4 268 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 PLCZ1Q86YW0 608 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 CADM2Q8N3J6 435 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 TMCO5AQ8N6Q1 288 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF610Q8N9Z0 462 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 OR5W2Q8NH69 310 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 RNF217Q8TC41 542 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 TMEM239Q8WW34 195 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 MUS81Q96NY9 551 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 PITX2Q99697 317 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 UBAP1Q9NZ09 502 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 FLRT3Q9NZU0 649 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 NDRG4Q9ULP0 352 aaKnown RBP18.24■□□□□ 0.51
PSEN1-225ENST00000560005 CARD8Q9Y2G2 431 aa18.24■□□□□ 0.51
PSEN1-225ENST00000560005 TLX2O43763 284 aaPredicted RBP18.23■□□□□ 0.51
PSEN1-225ENST00000560005 TMCC2O75069 709 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 BCAS1O75363 584 aaPredicted RBP18.23■□□□□ 0.51
PSEN1-225ENST00000560005 CGAP01215 116 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 THBDP07204 575 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 TOP3AQ13472 1001 aaPredicted RBP18.23■□□□□ 0.51
PSEN1-225ENST00000560005 CD226Q15762 336 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF691Q5VV52 312 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 KLHL17Q6TDP4 642 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 ZER1Q7Z7L7 766 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 MARCH3Q86UD3 253 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 NKAIN4Q8IVV8 208 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 UBQLNLQ8IYU4 475 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF611Q8N823 705 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 B4GALNT2Q8NHY0 566 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF563Q8TA94 476 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 RNF138Q8WVD3 245 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 PRSS27Q9BQR3 290 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 TEX12Q9BXU0 123 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 REG4Q9BYZ8 158 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 SLC19A3Q9BZV2 496 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 SCOCQ9UIL1 159 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 DKKL1Q9UK85 242 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 MYRFQ9Y2G1 1151 aa18.23■□□□□ 0.51
PSEN1-225ENST00000560005 KLF4O43474 513 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 CD5LO43866 347 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 MPZL2O60487 215 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 LYPD3O95274 346 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 IGF2P01344 180 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 THY1P04216 161 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 LYNP07948 512 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 CD8BP10966 210 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 FPR3P25089 353 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 SLC1A3P43003 542 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 GSSP48637 474 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 CCR4P51679 360 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 PRKCDQ05655 676 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 LINC00114Q6XXX2 140 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 RASSF6Q6ZTQ3 369 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 GATSQ8NAP1 163 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 TMEM234Q8WY98 164 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 LAMP3Q9UQV4 416 aa18.22■□□□□ 0.51
PSEN1-225ENST00000560005 A0A087WUJ7 227 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 E9PQ18 207 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 HS3ST1O14792 307 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 GNAO1P09471 354 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 GGT2P36268 569 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 HTR3AP46098 478 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 OMPP47874 163 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 IDH2P48735 452 aaKnown RBP18.21■□□□□ 0.51
PSEN1-225ENST00000560005 RNF144AP50876 292 aaPredicted RBP18.21■□□□□ 0.51
PSEN1-225ENST00000560005 CTBP2P56545 445 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 CDC42P60953 191 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 CSNK2BP67870 215 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF117Q03924 483 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 BCL2A1Q16548 175 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 CHRFAM7AQ494W8 412 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 OR5M10Q6IEU7 315 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 RPL13AP3Q6NVV1 102 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 NRMQ8IXM6 262 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 SLC43A2Q8N370 569 aa18.21■□□□□ 0.51
PSEN1-225ENST00000560005 CLDN22Q8N7P3 220 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms