RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 PNPLA2Q96AD5 504 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 ZNF582Q96NG8 517 aaPredicted RBP10.9□□□□□ -0.67
HERC1-205ENST00000559886 UCN2Q96RP3 112 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 DDOQ99489 341 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 TIMP4Q99727 224 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 BLOC1S6Q9UL45 172 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 NOX1Q9Y5S8 564 aa10.9□□□□□ -0.67
HERC1-205ENST00000559886 FAM183AA6NL82 134 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 SMAD9O15198 467 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 VAMP5O95183 116 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 CPN1P15169 458 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 ENPP1P22413 925 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 KRR1Q13601 381 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 MESTQ5EB52 335 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 ARMC4Q5T2S8 1044 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 NXNL2Q5VZ03 156 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 PLBD1Q6P4A8 553 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 ZNF519Q8TB69 540 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 CPNE4Q96A23 557 aaPredicted RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 SCN3BQ9NY72 215 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 SPENQ96T58 3664 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 GTF3C1Q12789 2109 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 PRODHO43272 600 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 WISP2O76076 250 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 CRYABP02511 175 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 IFNGR1P15260 489 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 PAICSP22234 425 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 ACVR2AP27037 513 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 CDKN2AP42771 156 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 DAP3P51398 398 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 NUDT6P53370 316 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 RPS3AP61247 264 aaKnown RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 POU3F1Q03052 451 aaPredicted RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 SRYQ05066 204 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 POU4F3Q15319 338 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 SLC35D2Q76EJ3 337 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 GPAT4Q86UL3 456 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 CYB561A3Q8NBI2 242 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 NMNAT3Q96T66 252 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 DUSP21Q9H596 190 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 AMBNQ9NP70 447 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 PAQR5Q9NXK6 330 aaPredicted RBP10.89□□□□□ -0.67
HERC1-205ENST00000559886 TPRKBQ9Y3C4 175 aa10.89□□□□□ -0.67
HERC1-205ENST00000559886 SVILO95425 2214 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 IGHV3-15A0A0B4J1V0 119 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 NPIPA5E9PKD4 350 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 AQP7O14520 342 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 FAM20BO75063 409 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 GABARAPL2P60520 117 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 ADCK1Q86TW2 530 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 BBS1Q8NFJ9 593 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 ZNF845Q96IR2 970 aaPredicted RBP10.88□□□□□ -0.67
HERC1-205ENST00000559886 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 MED20Q9H944 212 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 PAK1IP1Q9NWT1 392 aaPredicted RBP10.88□□□□□ -0.67
HERC1-205ENST00000559886 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 PSORS1C1Q9UIG5 152 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 NPIPA1Q9UND3 350 aa10.88□□□□□ -0.67
HERC1-205ENST00000559886 SNTNA6NMZ2 147 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 CLCA1A8K7I4 914 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 BCL10O95999 233 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 ZNF43P17038 809 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 ACVR1BP36896 505 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SLC15A1P46059 708 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SLC35A2P78381 396 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SLC17A1Q14916 467 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 LEG1Q6P5S2 330 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 JAZF1Q86VZ6 243 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 GID4Q8IVV7 300 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 Q8NA96 180 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 RFKQ969G6 155 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 OTULINQ96BN8 352 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 TXNDC15Q96J42 360 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SF3B5Q9BWJ5 86 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 FKBP14Q9NWM8 211 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 H2AFY2Q9P0M6 372 aaPredicted RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 RPL36Q9Y3U8 105 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 A6NIZ1 184 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 EIF4E1BA6NMX2 242 aaKnown RBP10.87□□□□□ -0.67
HERC1-205ENST00000559886 PTGES3LE9PB15 166 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 M0R3G1 203 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 XKRYO14609 159 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 SLC2A5P22732 501 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 RAP1BP61224 184 aa10.87□□□□□ -0.67
HERC1-205ENST00000559886 RAP1AP62834 184 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms