RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SDHAP31040 664 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 PCYT1AP49585 367 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 DAP3P51398 398 aaKnown RBP9.3□□□□□ -0.92
TPM1-221ENST00000559831 BIDP55957 195 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 CLDN17P56750 224 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 RPL27P61353 136 aaKnown RBP9.3□□□□□ -0.92
TPM1-221ENST00000559831 RBPJQ06330 500 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM1-221ENST00000559831 IL18R1Q13478 541 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 KRR1Q13601 381 aaKnown RBP9.3□□□□□ -0.92
TPM1-221ENST00000559831 GPR139Q6DWJ6 353 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 USP51Q70EK9 711 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 CCDC71Q8IV32 467 aaPredicted RBP9.3□□□□□ -0.92
TPM1-221ENST00000559831 TCEANCQ8N8B7 351 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 SDR9C7Q8NEX9 313 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 OR52E2Q8NGJ4 325 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 FAM57AQ8TBR7 257 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ZPLD1Q8TCW7 415 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ASB10Q8WXI3 467 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 UBE2FQ969M7 185 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 TXNDC15Q96J42 360 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 IL4I1Q96RQ9 567 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ANKRD60Q9BZ19 345 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 RASSF1Q9NS23 344 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 MED29Q9NX70 200 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ZNF226Q9NYT6 803 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 KLHL21Q9UJP4 597 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 CLEC4AQ9UMR7 237 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 GPR52Q9Y2T5 361 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ZNF175Q9Y473 711 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 LRRC42Q9Y546 428 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 ALPK2Q86TB3 2170 aa9.3□□□□□ -0.92
TPM1-221ENST00000559831 DSPP15924 2871 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ZNF726A6NNF4 738 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ZNF716A6NP11 495 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 AHRRA9YTQ3 701 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 H7C1C5 153 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 XKRYO14609 159 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 PRRG2O14669 202 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 IMPA2O14732 288 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ARPC3O15145 178 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ATXN7O15265 892 aaPredicted RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 DENRO43583 198 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 TRAF3IP2O43734 574 aaPredicted RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 TLX2O43763 284 aaPredicted RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 IDH3BO43837 385 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 TGM6O95932 706 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 IGHMP01871 453 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 FCGR2AP12318 317 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 APEHP13798 732 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 EDN3P14138 238 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ACADSP16219 412 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 HIST1H1CP16403 213 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 ZNF3P17036 446 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ACVR2AP27037 513 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 LCN6P62502 163 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 MED21Q13503 144 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 SLC17A1Q14916 467 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 POU4F3Q15319 338 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 SF3B4Q15427 424 aaKnown RBP eCLIP9.29□□□□□ -0.921e-9■■□□□ 12.9
TPM1-221ENST00000559831 ACSF3Q4G176 576 aaPredicted RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 MESTQ5EB52 335 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 C1orf185Q5T7R7 199 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CARD17Q5XLA6 110 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 KRT80Q6KB66 452 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 LEG1Q6P5S2 330 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 RPTNQ6XPR3 784 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CREB3L2Q70SY1 520 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 FAM122BQ7Z309 247 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 THAP5Q7Z6K1 395 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ENTHD1Q8IYW4 607 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ARIH2OSQ8N7S6 290 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CYB561A3Q8NBI2 242 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CNIH3Q8TBE1 160 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 RNF128Q8TEB7 428 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 ZNF385AQ96PM9 386 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 EMC6Q9BV81 110 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 SF3B5Q9BWJ5 86 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 FN3KQ9H479 309 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CALHM2Q9HA72 323 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 FANCFQ9NPI8 374 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CMC2Q9NRP2 79 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 KLHL9Q9P2J3 617 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 CLCF1Q9UBD9 225 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 SH3BGRL2Q9UJC5 107 aa9.29□□□□□ -0.92
TPM1-221ENST00000559831 PHF3Q92576 2039 aaKnown RBP9.29□□□□□ -0.92
TPM1-221ENST00000559831 LOC102725191A0A1B0GVB3 256 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 SLC35F4A4IF30 521 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 A6NIZ1 184 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 FAM183AA6NL82 134 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 AKAP8O43823 692 aaKnown RBP9.28□□□□□ -0.92
TPM1-221ENST00000559831 MPZL2O60487 215 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 WDR1O75083 606 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 TXNDC12O95881 172 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 RENP00797 406 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 GABRA1P14867 456 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 FMO3P31513 532 aa9.28□□□□□ -0.92
TPM1-221ENST00000559831 CDKN2AP42771 156 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms