RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RNF13O43567 381 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 CHP2O43745 196 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 PIP5K1CO60331 668 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 SLC43A1O75387 559 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 SOD3P08294 240 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 LSP1P33241 339 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 PTH2RP49190 550 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 ARF1P84077 181 aaKnown RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 PIN1Q13526 163 aaPredicted RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 MELKQ14680 651 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 OCLNQ16625 522 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 MS4A18Q3C1V0 323 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 COQ5Q5HYK3 327 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 PHYHD1Q5SRE7 291 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 OR7E24Q6IFN5 339 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 ZNF613Q6PF04 617 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 KLHL17Q6TDP4 642 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 C6orf89Q6UWU4 347 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 SEZ6L2Q6UXD5 910 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 YTHDF3Q7Z739 585 aaKnown RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 VTCN1Q7Z7D3 282 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 NKAIN4Q8IVV8 208 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 WDFY1Q8IWB7 410 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 POMGNT2Q8NAT1 580 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 SMAP2Q8WU79 429 aaPredicted RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 TMEM255BQ8WV15 326 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 CXXC4Q9H2H0 198 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 C12orf10Q9HB07 376 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 SLC17A5Q9NRA2 495 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 CISD1Q9NZ45 108 aaKnown RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 B3GAT1Q9P2W7 334 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 MAGED1Q9Y5V3 778 aaPredicted RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 V9GYQ6 96 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 ARID1AO14497 2285 aa10.52□□□□□ -0.73
TPM1-216ENST00000558910 ZNF469Q96JG9 3925 aaPredicted RBP10.52□□□□□ -0.73
TPM1-216ENST00000558910 FLNAP21333 2647 aaKnown RBP10.51□□□□□ -0.73
TPM1-216ENST00000558910 GMNCA6NCL1 334 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 TRIM64A6NGJ6 449 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 TRIM64BA6NI03 449 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 BLOC1S5-TXNDC5H3BN57 136 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 J3KTA2 159 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CXCR6O00574 342 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 NME4O00746 187 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 LYPD3O95274 346 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CNOT4O95628 575 aaKnown RBP10.51□□□□□ -0.73
TPM1-216ENST00000558910 HIST1H2ABP04908 130 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 C8BP07358 591 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CD40P25942 277 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 KDELR2P33947 212 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 BIDP55957 195 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 ATP5J2P56134 94 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 UBE2NP61088 152 aaKnown RBP10.51□□□□□ -0.73
TPM1-216ENST00000558910 TGFBR3Q03167 851 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 PUDPQ08623 228 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 NPRL3Q12980 569 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CEACAM16Q2WEN9 425 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 TBRG1Q3YBR2 411 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 ERICH5Q6P6B1 374 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 VHLLQ6RSH7 139 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 TMEM108Q6UXF1 575 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CCDC80Q76M96 950 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 HIST3H2AQ7L7L0 130 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 SLC15A3Q8IY34 581 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 RBM15BQ8NDT2 890 aaKnown RBP10.51□□□□□ -0.73
TPM1-216ENST00000558910 OR1K1Q8NGR3 316 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 OR6N1Q8NGY5 312 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 RASSF5Q8WWW0 418 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 HIST1H2ACQ93077 130 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 FAM162AQ96A26 154 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 MUS81Q96NY9 551 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 OR2M2Q96R28 347 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 TMEM204Q9BSN7 226 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CXorf56Q9H5V9 222 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 EFCAB1Q9HAE3 211 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 MRGBPQ9NV56 204 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 ADA2Q9NZK5 511 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 EGFL7Q9UHF1 273 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
TPM1-216ENST00000558910 SHISA9B4DS77 424 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 ATP6V1G2-DDX39BF2Z307 99 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 PDLIM1O00151 329 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 PLPP3O14495 311 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 ARHGEF9O43307 516 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 TRAF3IP2O43734 574 aaPredicted RBP10.5□□□□□ -0.73
TPM1-216ENST00000558910 NDUFS7O75251 213 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 WNT11O96014 354 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 SERPINA1P01009 418 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 NPPAP01160 153 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 IFNA14P01570 189 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 IFNGR1P15260 489 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 FUT1P19526 365 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 TCN1P20061 433 aaPredicted RBP10.5□□□□□ -0.73
TPM1-216ENST00000558910 FUT4P22083 530 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 GSK3BP49841 420 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 FABP6P51161 128 aa10.5□□□□□ -0.73
TPM1-216ENST00000558910 UGT2B15P54855 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms