RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MYO9AB2RTY4 2548 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 HCFC1P51610 2035 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 FAM90A27PA6NNH2 459 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 NPIPB9F8W1W9 429 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 GNB5O14775 395 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 WDR1O75083 606 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 SOX14O95416 240 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 IL33O95760 270 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 IGKV1D-16P01601 117 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 HPNP05981 417 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 GLI4P10075 376 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 NAGAP17050 411 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 GTF2E2P29084 291 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 CHRNB4P30926 498 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 IFNA8P32881 189 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 GIPRP48546 466 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 PSMD4P55036 377 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 RUNX1T1Q06455 604 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 TFF3Q07654 80 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 RAB40BQ12829 278 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 GINS1Q14691 196 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ZNF141Q15928 474 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 DECR1Q16698 335 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 SYT14P1Q58G82 188 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ZNF311Q5JNZ3 666 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 TMEM81Q6P7N7 255 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 RBM45Q8IUH3 476 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 ACBD4Q8NC06 268 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 TOR1AIP2Q8NFQ8 470 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 OR4N2Q8NGD1 307 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 OR4K5Q8NGD3 323 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 OR52I1Q8NGK6 324 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 OR52P1PQ8NH57 321 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 LILRB4Q8NHJ6 448 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ASB5Q8WWX0 329 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 HTRA1Q92743 480 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ZG16BQ96DA0 208 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ZNF582Q96NG8 517 aaPredicted RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 ARHGDIGQ99819 225 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 POLR2J2Q9GZM3 115 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 HOXD1Q9GZZ0 328 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 METTL7AQ9H8H3 244 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 CACYBPQ9HB71 228 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 MAN2C1Q9NTJ4 1040 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 FBXO34Q9NWN3 711 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ALKBH4Q9NXW9 302 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 EXOSC1Q9Y3B2 195 aaKnown RBP9.28□□□□□ -0.92
TPM1-212ENST00000558347 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
TPM1-212ENST00000558347 ARHGAP21Q5T5U3 1957 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 A0A0G2JNJ9 132 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 KDM4EB2RXH2 506 aaPredicted RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 PRODHO43272 600 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 PRKYO43930 277 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 ICOSLGO75144 302 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TRAPPC6AO75865 159 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TOXO94900 526 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 EPPINO95925 133 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 MYL12AP19105 171 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TNFSF8P32971 234 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 RPS19P39019 145 aaKnown RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 ADH7P40394 386 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TPTEP56180 551 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 CRYZQ08257 329 aaKnown RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 TSPAN31Q12999 210 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TPBGQ13641 420 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 LARS2Q15031 903 aaKnown RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 TRAM2Q15035 370 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 GPR68Q15743 365 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 BCL2A1Q16548 175 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 ZSWIM7Q19AV6 140 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 FLYWCH1Q4VC44 716 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 EIPR1Q53HC9 387 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 C1orf185Q5T7R7 199 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TIGD3Q6B0B8 471 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 CCBE1Q6UXH8 406 aaPredicted RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 TMPRSS11AQ6ZMR5 421 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 RASSF6Q6ZTQ3 369 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 GDPD3Q7L5L3 318 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 NUP54Q7Z3B4 507 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 GDF7Q7Z4P5 450 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 ZER1Q7Z7L7 766 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 ZAR1Q86SH2 424 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 VRK2Q86Y07 508 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TMEM163Q8TC26 289 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 SLC38A2Q96QD8 506 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 SDHCQ99643 169 aaPredicted RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 COQ7Q99807 217 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 ENKD1Q9H0I2 346 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 EXOSC4Q9NPD3 245 aaKnown RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
TPM1-212ENST00000558347 MED17Q9NVC6 651 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 TVP23BQ9NYZ1 205 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 Q9UFV3 132 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 CLEC2DQ9UHP7 191 aa9.27□□□□□ -0.93
TPM1-212ENST00000558347 KCNE5Q9UJ90 142 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms