RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TMEM43Q9BTV4 400 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 KATNB1Q9BVA0 655 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 EVA1AQ9H8M9 152 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 ZNF446Q9NWS9 450 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 MRPL39Q9NYK5 338 aaKnown RBP10.38□□□□□ -0.75
HERC1-202ENST00000558324 SLC7A7Q9UM01 511 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 USP22Q9UPT9 525 aa10.38□□□□□ -0.75
HERC1-202ENST00000558324 LOC102725191A0A1B0GVB3 256 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 ZNF503-AS2A6NEH8 195 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 RPL36A-HNRNPH2H7BZ11 118 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 H7C417 338 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 FXYD1O00168 92 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 PLPP3O14495 311 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 OR6A2O95222 327 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 CH25HO95992 272 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 THY1P04216 161 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 C8BP07358 591 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 ADORA3P0DMS8 318 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 BMP4P12644 408 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 TNFRSF1BP20333 461 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 CALCRP30988 508 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 GZMMP51124 257 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 CRYBA2P53672 197 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 KLF10Q13118 480 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 C1QTNF12Q5T7M4 302 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 NANOGP8Q6NSW7 305 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 TTC33Q6PID6 262 aaPredicted RBP10.37□□□□□ -0.75
HERC1-202ENST00000558324 MDP1Q86V88 176 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 WDFY1Q8IWB7 410 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 C20orf196Q8IYI0 205 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 OR6N1Q8NGY5 312 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 MAGEE2Q8TD90 523 aaPredicted RBP10.37□□□□□ -0.75
HERC1-202ENST00000558324 LRRC58Q96CX6 371 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
HERC1-202ENST00000558324 ECSITQ9BQ95 431 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 ULBP2Q9BZM5 246 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 NANOGQ9H9S0 305 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 CA10Q9NS85 328 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 SH3GLB1Q9Y371 365 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 NOX1Q9Y5S8 564 aa10.37□□□□□ -0.75
HERC1-202ENST00000558324 FN1P02751 2386 aaKnown RBP10.37□□□□□ -0.75
HERC1-202ENST00000558324 LOC100653049A0A140TA62 436 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 TRAPPC13A5PLN9 417 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 ZNF726A6NNF4 738 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
HERC1-202ENST00000558324 SHOX2O60902 331 aaPredicted RBP10.36□□□□□ -0.75
HERC1-202ENST00000558324 KRT34O76011 436 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 LYPD3O95274 346 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 MT-ATP6P00846 226 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 HLA-HP01893 362 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 OR4A8P0C604 315 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 UMPSP11172 480 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 IFNGR1P15260 489 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 B4GALT1P15291 398 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 SNRPD2P62316 118 aaKnown RBP10.36□□□□□ -0.75
HERC1-202ENST00000558324 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 DEF8Q6ZN54 512 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 SLC46A3Q7Z3Q1 461 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 LRRC17Q8N6Y2 441 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 PROX1Q92786 737 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 B3GAT2Q9NPZ5 323 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 SAR1AQ9NR31 198 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 CRNNQ9UBG3 495 aaPredicted RBP10.36□□□□□ -0.75
HERC1-202ENST00000558324 POFUT2Q9Y2G5 429 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 PMF1-BGLAPU3KQ54 211 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 NIPBLQ6KC79 2804 aaeCLIP10.36□□□□□ -0.75
HERC1-202ENST00000558324 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
HERC1-202ENST00000558324 BBIP1A8MTZ0 92 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 GPRIN2O60269 458 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 IGKV3-15P01624 115 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CD79AP11912 226 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CBR1P16152 277 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 SERPINF1P36955 418 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 EFNA4P52798 201 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 BIDP55957 195 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 TAS2R41P59536 307 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 PIGFQ07326 219 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 MELKQ14680 651 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 MAPRE2Q15555 327 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 ADIPOQQ15848 244 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CARTPTQ16568 116 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 ZNF74Q16587 644 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 SWI5Q1ZZU3 235 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 MST1LQ2TV78 715 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 LRRC23Q53EV4 343 aaPredicted RBP10.35□□□□□ -0.75
HERC1-202ENST00000558324 LINC00114Q6XXX2 140 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 ZNF813Q6ZN06 617 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CCDC80Q76M96 950 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 PXKQ7Z7A4 578 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CARM1Q86X55 608 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
HERC1-202ENST00000558324 OR8J3Q8NGG0 315 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms