RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DEFB133Q30KQ1 61 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TP53I3Q53FA7 332 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 C6orf183Q5T699 404 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 FAM69AQ5T7M9 428 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 LINC01590Q5TEZ4 76 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 EEF1A1P5Q5VTE0 462 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 FCRLBQ6BAA4 426 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 B3GLCTQ6Y288 498 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 GRINAQ7Z429 371 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NOXA1Q86UR1 476 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 PLCZ1Q86YW0 608 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 LRRC17Q8N6Y2 441 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 ZNF441Q8N8Z8 693 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 OR4M1Q8NGD0 313 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 OR6K6Q8NGW6 343 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NSMAFQ92636 917 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 ADAD1Q96M93 576 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 ADOQ96SZ5 270 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 TPSD1Q9BZJ3 242 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 WWTR1Q9GZV5 400 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 COMMD4Q9H0A8 199 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 DPAGT1Q9H3H5 408 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 WDR76Q9H967 626 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 PLEKHA1Q9HB21 404 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 KLHL1Q9NR64 748 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 STMN3Q9NZ72 180 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 PPIEQ9UNP9 301 aaKnown RBP7.56□□□□□ -1.2
SPG11-209ENST00000558253 FKBP7Q9Y680 259 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 CACNG2Q9Y698 323 aa7.56□□□□□ -1.2
SPG11-209ENST00000558253 F5P12259 2224 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 IGLV3-12A0A075B6K2 115 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 A0A0G2JMP0 313 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 A0A0X1KG70 313 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 A0A1W2PRG6 482 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 HCRTR2O43614 444 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 FADS1O60427 444 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR6A2O95222 327 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 C1QBP02746 253 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 BGLAPP02818 100 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 GYPBP06028 91 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 FKBP2P26885 142 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 CDKN2AP42771 156 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 CCR4P51679 360 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 CAPZA1P52907 286 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR1D5P58170 312 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 RRAS2P62070 204 aaPredicted RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 RPS11P62280 158 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPG11-209ENST00000558253 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 RPL18Q07020 188 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 ZP4Q12836 540 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 MAB21L1Q13394 359 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ALKBH1Q13686 389 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 CDK10Q15131 360 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 CD226Q15762 336 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 Q499Y3 187 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 PLA1AQ53H76 456 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 CEP78Q5JTW2 689 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 SIGIRRQ6IA17 410 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 RHBDD2Q6NTF9 364 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TMEM71Q6P5X7 295 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 KCTD18Q6PI47 426 aaPredicted RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 DNM1P34Q6PK57 102 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 SSX6Q7RTT6 188 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 NR2C2APQ86WQ0 139 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 CDC20BQ86Y33 519 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TIGD4Q8IY51 512 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TOMM5Q8N4H5 51 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 FRMD1Q8N878 549 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ASCC1Q8N9N2 400 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 ZNF248Q8NDW4 579 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR4M2Q8NGB6 313 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR5L2Q8NGL0 311 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR8K3Q8NH51 312 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR5AK2Q8NH90 309 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 OR1L3Q8NH93 324 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ZNF417Q8TAU3 575 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ZNF671Q8TAW3 534 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 NUBPLQ8TB37 319 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ST8SIA1Q92185 356 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 AKAP1Q92667 903 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPG11-209ENST00000558253 S100A16Q96FQ6 103 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 INTS14Q96SY0 518 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 LPAR4Q99677 370 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 NUDT9Q9BW91 350 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 GON7Q9BXV9 100 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 TSPAN10Q9H1Z9 355 aaPredicted RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 MMP28Q9H239 520 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 PPIL3Q9H2H8 161 aaKnown RBP7.55□□□□□ -1.2
SPG11-209ENST00000558253 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 B3GAT2Q9NPZ5 323 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 LAMP5Q9UJQ1 280 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 FBXL4Q9UKA2 621 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 POU2F3Q9UKI9 436 aa7.55□□□□□ -1.2
SPG11-209ENST00000558253 CA14Q9ULX7 337 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms