RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 BPIFA2Q96DR5 249 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 ALKBH3Q96Q83 286 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-209ENST00000557342 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 MUC13Q9H3R2 512 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 OBP2BQ9NPH6 170 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 SLC17A5Q9NRA2 495 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 C20orf141Q9NUB4 165 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 MED29Q9NX70 200 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 RHCGQ9UBD6 479 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 PRPF19Q9UMS4 504 aaKnown RBP10.97□□□□□ -0.65
SLIRP-209ENST00000557342 SLC25A15Q9Y619 301 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 HEATR1Q9H583 2144 aaKnown RBP10.97□□□□□ -0.65
SLIRP-209ENST00000557342 PRR14LQ5THK1 2151 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 ABCA4P78363 2273 aa10.97□□□□□ -0.65
SLIRP-209ENST00000557342 DSCAMO60469 2012 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 A0A1W2PPR1 153 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 A0A1W2PRG6 482 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 SLC35F4A4IF30 521 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 FFAR1O14842 300 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 SERPINI2O75830 405 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 H1F0P07305 194 aaKnown RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 T-ENOLP0DO92 83 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 IFNGR1P15260 489 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 CDH2P19022 906 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MSX2P35548 267 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 SMIM11AP58511 58 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 PRKCDQ05655 676 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 LGALS3BPQ08380 585 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ACKR1Q16570 336 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ANKDD1AQ495B1 522 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MTX3Q5HYI7 312 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ANKRD16Q6P6B7 361 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 NHLRC1Q6VVB1 395 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 RINLQ6ZS11 566 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MBOAT2Q6ZWT7 520 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 HDDC2Q7Z4H3 204 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 C20orf196Q8IYI0 205 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 TMEM123Q8N131 208 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 OR1K1Q8NGR3 316 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 OR6N1Q8NGY5 312 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 OR6X1Q8NH79 312 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MAGEE2Q8TD90 523 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 POP5Q969H6 163 aaKnown RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 TXNDC15Q96J42 360 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 EMC6Q9BV81 110 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 LIME1Q9H400 295 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 NMNAT1Q9HAN9 279 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 GPR35Q9HC97 309 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MOV10Q9HCE1 1003 aaKnown RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 NDUFAF4Q9P032 175 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ACTR3BQ9P1U1 418 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 STX18Q9P2W9 335 aaKnown RBP10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ITGB1BP2Q9UKP3 347 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 MGAT4BQ9UQ53 548 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 PLEKHA6Q9Y2H5 1048 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 RNF115Q9Y4L5 304 aa10.96□□□□□ -0.65
SLIRP-209ENST00000557342 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
SLIRP-209ENST00000557342 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.66
SLIRP-209ENST00000557342 A0A1W2PRQ8 180 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 M0R3G1 203 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 PIP5K1CO60331 668 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 STAMBPO95630 424 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 BCL10O95999 233 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 TSPAN19P0C672 248 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 PTAFRP25105 342 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 SLC9A3P48764 834 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 DAP3P51398 398 aaKnown RBP10.95□□□□□ -0.66
SLIRP-209ENST00000557342 IST1P53990 364 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 BIDP55957 195 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 UBE2NP61088 152 aaKnown RBP10.95□□□□□ -0.66
SLIRP-209ENST00000557342 RPL18Q07020 188 aaKnown RBP10.95□□□□□ -0.66
SLIRP-209ENST00000557342 BSPH1Q075Z2 132 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 CAMK2DQ13557 499 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 DGCR6Q14129 220 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 CARD17Q5XLA6 110 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 SEZ6L2Q6UXD5 910 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 TMEM108Q6UXF1 575 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 LINGO2Q7L985 606 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 NRMQ8IXM6 262 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 MBD6Q96DN6 1003 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-209ENST00000557342 RADILQ96JH8 1075 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 C7orf34Q96L11 122 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 KRCC1Q9NPI7 259 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-209ENST00000557342 INIPQ9NRY2 104 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 TAS2R1Q9NYW7 299 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 TMEM5Q9Y2B1 443 aa10.95□□□□□ -0.66
SLIRP-209ENST00000557342 V9GYQ6 96 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms