RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 C1orf140Q5VVS0 124 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 KDM4DQ6B0I6 523 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 C1orf94Q6P1W5 598 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 TMPRSS11FQ6ZWK6 438 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 ZER1Q7Z7L7 766 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 CDC20BQ86Y33 519 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 P3H2Q8IVL5 708 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 ATP6V1C2Q8NEY4 427 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 PFN4Q8NHR9 129 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 ABHD3Q8WU67 409 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 NRGNQ92686 78 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 NINJ1Q92982 152 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 GTPBP3Q969Y2 492 aaKnown RBP8.56□□□□□ -1.04
ACTN1-215ENST00000555616 SGTBQ96EQ0 304 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
ACTN1-215ENST00000555616 SLC29A1Q99808 456 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 NDEL1Q9GZM8 345 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 SMURF2Q9HAU4 748 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 MEPEQ9NQ76 525 aaPredicted RBP8.56□□□□□ -1.04
ACTN1-215ENST00000555616 PLSCR4Q9NRQ2 329 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 SMPD3Q9NY59 655 aaPredicted RBP8.56□□□□□ -1.04
ACTN1-215ENST00000555616 KLHL13Q9P2N7 655 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 RAB26Q9ULW5 256 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 AKAP9Q99996 3911 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 TEP1Q99973 2627 aaKnown RBP8.56□□□□□ -1.04
ACTN1-215ENST00000555616 MED12LQ86YW9 2145 aa8.56□□□□□ -1.04
ACTN1-215ENST00000555616 HEATR5AQ86XA9 2040 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 UNC119BA6NIH7 251 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 C16orf97H3BN30 126 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 SMAD9O15198 467 aaKnown RBP8.55□□□□□ -1.04
ACTN1-215ENST00000555616 NPIPB7O75200 414 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 POU2F1P14859 743 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 GTF2E2P29084 291 aaKnown RBP8.55□□□□□ -1.04
ACTN1-215ENST00000555616 IDUAP35475 653 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 GPR4P46093 362 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
ACTN1-215ENST00000555616 OMPP47874 163 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 GSSP48637 474 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 SLC9A3P48764 834 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 DAPP51397 102 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 RAC3P60763 192 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 EGR4Q05215 589 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 MFSD13AQ14CX5 517 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 GTF2IRD2BQ6EKJ0 949 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 RPL13AP3Q6NVV1 102 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 PAMR1Q6UXH9 720 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 CD300LDQ6UXZ3 194 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 SPNS3Q6ZMD2 512 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 FCRLAQ7L513 359 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 GTF2IRD2Q86UP8 949 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 PARP8Q8N3A8 854 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF610Q8N9Z0 462 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 OR6S1Q8NH40 331 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 ROBO4Q8WZ75 1007 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 HIST1H2ACQ93077 130 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF570Q96NI8 536 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 TAPBPLQ9BX59 468 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 POTEKPQ9BYX7 375 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 FKRPQ9H9S5 495 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 C20orf141Q9NUB4 165 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 NDRG3Q9UGV2 375 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 TMEFF2Q9UIK5 374 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-215ENST00000555616 ST6GALNAC2Q9UJ37 374 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF229Q9UJW7 825 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 HDGFL3Q9Y3E1 203 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 F8P00451 2351 aa8.55□□□□□ -1.04
ACTN1-215ENST00000555616 PCNX3Q9H6A9 2034 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ZC3H12DA2A288 527 aaKnown RBP8.54□□□□□ -1.04
ACTN1-215ENST00000555616 H3BN98 237 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 KLF4O43474 513 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 DNPH1O43598 174 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 OR7A10O76100 309 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 CH25HO95992 272 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 OSMP13725 252 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 MAKP20794 623 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ESRRGP62508 458 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 CSNK2A1P68400 391 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-215ENST00000555616 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF74Q16587 644 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ANKDD1AQ495B1 522 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ABLIM2Q6H8Q1 611 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 KLHL17Q6TDP4 642 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 RASSF6Q6ZTQ3 369 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 NANOGNBQ7Z5D8 188 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 GALNT5Q7Z7M9 940 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 OAFQ86UD1 273 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 SLC43A2Q8N370 569 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 CLDN22Q8N7P3 220 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF555Q8NEP9 628 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 MFSD8Q8NHS3 518 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 FANK1Q8TC84 345 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 TAAR8Q969N4 342 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 KTI12Q96EK9 354 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-215ENST00000555616 WFIKKN1Q96NZ8 548 aa8.54□□□□□ -1.04
ACTN1-215ENST00000555616 OR5B2Q96R09 309 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms