RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 OFCC1Q8IZS5 231 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 FITM2Q8N6M3 262 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 LILRB1Q8NHL6 650 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-219ENST00000555563 SGTBQ96EQ0 304 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 NELFAQ9H3P2 528 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 MAN2C1Q9NTJ4 1040 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 BEX4Q9NWD9 120 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-219ENST00000555563 TAS2R5Q9NYW4 299 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 RHCGQ9UBD6 479 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 RPS6KA6Q9UK32 745 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 MED31Q9Y3C7 131 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 TACC2O95359 2948 aa12.02□□□□□ -0.49
SHMT2-219ENST00000555563 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 SLC35F4A4IF30 521 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 SHISA9B4DS77 424 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 M0R1B8 84 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 M0R3G1 203 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 ABCD4O14678 606 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 FFAR1O14842 300 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 RNF13O43567 381 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 OR6A2O95222 327 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 HIST1H2ABP04908 130 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 HSD17B1P14061 328 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 IFNGR1P15260 489 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 IFNA8P32881 189 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 SH3BGRP55822 239 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 MXRA7P84157 204 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 KRT72Q14CN4 511 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 FXNQ16595 210 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 CEACAM16Q2WEN9 425 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 SAMD4BQ5PRF9 694 aaKnown RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 PHYHD1Q5SRE7 291 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 GLYATQ6IB77 296 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 KLHL17Q6TDP4 642 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 C16orf89Q6UX73 402 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 TMEM108Q6UXF1 575 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 HIST3H2AQ7L7L0 130 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 FAM86B1Q8N7N1 296 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 CCDC197Q8NCU1 140 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 ANKK1Q8NFD2 765 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 BCL2L2Q92843 193 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 HIST1H2ACQ93077 130 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 PIGTQ969N2 578 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-219ENST00000555563 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 HS6ST2Q96MM7 605 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
SHMT2-219ENST00000555563 A0A096LPE4 126 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 A0A1W2PPZ6 126 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 SEC14L2O76054 403 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 PRSS23O95084 383 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 IGF2P01344 180 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 PTAFRP25105 342 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 CD40P25942 277 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 BIDP55957 195 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 PRPS1P60891 318 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 ARF1P84077 181 aaKnown RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 RPL18Q07020 188 aaKnown RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 ZP4Q12836 540 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 CAMK2DQ13557 499 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 MELKQ14680 651 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 TRAM2Q15035 370 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 KRTAP21-3Q3LHN1 58 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 ANKRD16Q6P6B7 361 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 SLC35D2Q76EJ3 337 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF611Q8N823 705 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 FBXW5Q969U6 566 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 CDRT15Q96T59 188 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 PIP5K1AQ99755 562 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 FNDC11Q9BVV2 318 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 DCAF13Q9NV06 445 aaKnown RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 NDE1Q9NXR1 346 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 CD300AQ9UGN4 299 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 MAGEL2Q9UJ55 1249 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 SAMD4AQ9UPU9 718 aaKnown RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 MAGED1Q9Y5V3 778 aaPredicted RBP12□□□□□ -0.49
SHMT2-219ENST00000555563 ENPP4Q9Y6X5 453 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 V9GYQ6 96 aa12□□□□□ -0.49
SHMT2-219ENST00000555563 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ARPC4-TTLL3A0A0A6YYG9 625 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ZNF726A6NNF4 738 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 BLOC1S5-TXNDC5H3BN57 136 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 ARPC2O15144 300 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 SMPD2O60906 423 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 GMNNO75496 209 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 WNT11O96014 354 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 IFI30P13284 250 aa11.99□□□□□ -0.49
SHMT2-219ENST00000555563 FUT1P19526 365 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms