RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 OR2T3Q8NH03 318 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 OR4C6Q8NH72 309 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 VN1R17PQ8TDU5 208 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CCDC12Q8WUD4 166 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PATE1Q8WXA2 126 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ADIPOR1Q96A54 375 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TADA1Q96BN2 335 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TBC1D31Q96DN5 1066 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 RANBP9Q96S59 729 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LZTS2Q9BRK4 669 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HCAR1Q9BXC0 346 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CCSER1Q9C0I3 900 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 DPH5Q9H2P9 285 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PRSS16Q9NQE7 514 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 RBM28Q9NW13 759 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C1orf123Q9NWV4 160 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ELOVL2Q9NXB9 296 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM9Q9P0T7 183 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HMGXB4Q9UGU5 601 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LSM7Q9UK45 103 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CHMP2BQ9UQN3 213 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 EIF3LQ9Y262 564 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 BTRCQ9Y297 605 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 EXOSC1Q9Y3B2 195 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 NAALAD2Q9Y3Q0 740 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 U3KQA8 63 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HEATR5AQ86XA9 2040 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SYNJ2BP-COX16A0A087WUM0 186 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 GOLGA6L7A0A1B0GV03 622 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LRRC30A6NM36 301 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 A8MX80 341 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 A8MXQ7 604 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C19orf84I3L1E1 186 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 KPNA3O00505 521 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 AQP9O43315 295 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PPIHO43447 177 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LATO43561 262 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LANCL1O43813 399 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ALOX12BO75342 701 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SRSF10O75494 262 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 NOL4O94818 638 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 DIRAS3O95661 229 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 AK1P00568 194 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 F10P00742 488 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 IFNB1P01574 187 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 JCHAINP01591 159 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 THY1P04216 161 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 H2AFZP0C0S5 128 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CT45A10P0DMU9 189 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 THRBP10828 461 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 UMPSP11172 480 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LAMP1P11279 417 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SFTPCP11686 197 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PGAM2P15259 253 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 KCNE1P15382 129 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TNNI3P19429 210 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TCN2P20062 427 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 KLK2P20151 261 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 F8A1P23610 371 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CASP14P31944 242 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 DRD3P35462 400 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CYLC1P35663 651 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 RBMXP38159 391 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 OR1D4P47884 311 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ALDH3B2P48448 385 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 DUSP3P51452 185 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 POLR2FP61218 127 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CCL7P80098 99 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PUDPQ08623 228 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 IL18R1Q13478 541 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TRIP10Q15642 601 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CAMK4Q16566 473 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CFAP221Q4G0U5 840 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HSP90AA5PQ58FG0 334 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF311Q5JNZ3 666 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LGSNQ5TDP6 509 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 MARC1Q5VT66 337 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 MEDAGQ5VYS4 303 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SLC39A4Q6P5W5 647 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LRRC8BQ6P9F7 803 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 FAM199XQ6PEV8 388 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 BAIAP2L2Q6UXY1 529 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 GCNT7Q6ZNI0 430 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 Q6ZSR6 202 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CENPUQ71F23 418 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ERASQ7Z444 233 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 LHFPL4Q7Z7J7 247 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PARGQ86W56 976 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CBWD2Q8IUF1 395 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 DAW1Q8N136 415 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C12orf29Q8N999 325 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 KLHL30-AS1Q8NEE0 82 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PPP1R16AQ96I34 528 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HPDLQ96IR7 371 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CNDP1Q96KN2 507 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C16orf45Q96MC5 204 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 VPS35Q96QK1 796 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 MRPL45Q9BRJ2 306 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TBCDQ9BTW9 1192 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TBC1D10AQ9BXI6 508 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms