RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 EDNRAP25101 427 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 GBX2P52951 348 aaPredicted RBP8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 SF3A2Q15428 464 aaKnown RBP8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 ACKR1Q16570 336 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 GLYR1Q49A26 553 aaPredicted RBP8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 GPR139Q6DWJ6 353 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 CEACAM19Q7Z692 300 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 OR8H2Q8N162 312 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 OR2Y1Q8NGV0 311 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 OR2T4Q8NH00 348 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 ELP5Q8TE02 316 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 ST8SIA1Q92185 356 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 GHSRQ92847 366 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 MROQ9BYG7 248 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 NCDNQ9UBB6 729 aa8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 COL27A1Q8IZC6 1860 aaPredicted RBP8.21□□□□□ -1.1
RAB3IP-218ENST00000553099 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 NSG1A0A0A6YYJ2 146 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 TRBV2A0A0J9YWF9 115 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 RPP14O95059 124 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 JMJD7P0C870 316 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ZNF883P0CG24 379 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 NAGAP17050 411 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 GDI2P50395 445 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 IL10RAQ13651 578 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 OXA1LQ15070 435 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ZNF181Q2M3W8 571 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 EMC4Q5J8M3 183 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 FAM131AQ6UXB0 335 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 OR5M1Q8NGP8 315 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 HTRA1Q92743 480 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 PGLYRP3Q96LB9 341 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 PDCD1LG2Q9BQ51 273 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 PPIL3Q9H2H8 161 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ZNF160Q9HCG1 818 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 CACNA1HO95180 2353 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 LOC102723996A0A087X1L8 192 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 CBFA2T3O75081 653 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 TXNDC12O95881 172 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 HLA-DOBP13765 273 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 MYL9P24844 172 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SHC1P29353 583 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 OTX2P32243 289 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SLC25A1P53007 311 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SUMO3P55854 103 aaPredicted RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 RPL27P61353 136 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SIRPAP78324 504 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 NTRK2Q16620 822 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 DMKNQ6E0U4 476 aaPredicted RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 RAB11FIP2Q7L804 512 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 DPY19L4Q7Z388 723 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SYS1Q8N2H4 156 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ABHD4Q8TB40 342 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 STK35Q8TDR2 534 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 DDIT4LQ96D03 193 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 NXPE2Q96DL1 559 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SMIM19Q96E16 107 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 MRPL48Q96GC5 212 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ADAD1Q96M93 576 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 C5orf34Q96MH7 638 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 STRADBQ9C0K7 418 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 WDR76Q9H967 626 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 SDHAF3Q9NRP4 125 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ST6GALNAC2Q9UJ37 374 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 ING1Q9UK53 422 aaPredicted RBP8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 FBXL2Q9UKC9 423 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 IKZF2Q9UKS7 526 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 MOKQ9UQ07 419 aa8.2□□□□□ -1.1
RAB3IP-218ENST00000553099 DLGAP3O95886 979 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 CYC1P08574 325 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 OR8G3PP0DMU2 310 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 TCN2P20062 427 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 TGM1P22735 817 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 ETV6P41212 452 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 PTGDSP41222 190 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 APOBEC1P41238 236 aaKnown RBP8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 CASP3P42574 277 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 CDK5R1Q15078 307 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 ACSM3Q53FZ2 586 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 IDNKQ5T6J7 187 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 SLC16A9Q7RTY1 509 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 FAM220AQ7Z4H9 259 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 ZNF248Q8NDW4 579 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 OR11G2Q8NGC1 345 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 OR4K17Q8NGC6 315 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 TIGARQ9NQ88 270 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 KLHDC2Q9Y2U9 406 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 V9GYH0 126 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 LINC00854A0A1B0GVQ3 168 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 FABP12A6NFH5 140 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 PRR32B1ATL7 298 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 G3V3Y1 287 aa8.19□□□□□ -1.1
RAB3IP-218ENST00000553099 PLPP3O14495 311 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms