RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CDK20Q8IZL9 346 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 OR6N1Q8NGY5 312 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 BPIFA2Q96DR5 249 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 OR2M2Q96R28 347 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 EMC6Q9BV81 110 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 C1orf21Q9H246 121 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 NMNAT1Q9HAN9 279 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 MAN2C1Q9NTJ4 1040 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 NDUFAF4Q9P032 175 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 ACTR3BQ9P1U1 418 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 ANKRD17O75179 2603 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 FBN2P35556 2912 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 A0A1W2PRG6 482 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC35F4A4IF30 521 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 MCIDASD6RGH6 385 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 IFNGR1P15260 489 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 BIDP55957 195 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 VLDLRP98155 873 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 CAMK2DQ13557 499 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 CYP2R1Q6VVX0 501 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC35D2Q76EJ3 337 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 RNF113BQ8IZP6 322 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 CCDC124Q96CT7 223 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 TXNDC15Q96J42 360 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 ADAD1Q96M93 576 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 MUS81Q96NY9 551 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 PIP5K1AQ99755 562 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 KRCC1Q9NPI7 259 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 TAS2R5Q9NYW4 299 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 TAS2R1Q9NYW7 299 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 AMDHD2Q9Y303 409 aa16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 MAGED1Q9Y5V3 778 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-216ENST00000552301 DCHS2Q6V1P9 2916 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 M0R3G1 203 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 GYG2O15488 501 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 PRSS23O95084 383 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 BCL10O95999 233 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 WNT11O96014 354 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 FABP3P05413 133 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 CD3EP07766 207 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 DNASE1P24855 282 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 CSNK1A1P48729 337 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 SMIM11AP58511 58 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 SPIBQ01892 262 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 RPL18Q07020 188 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 KLHL17Q6TDP4 642 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 PAMR1Q6UXH9 720 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 ZNF704Q6ZNC4 412 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 MBOAT2Q6ZWT7 520 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 HDDC2Q7Z4H3 204 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 DHFR2Q86XF0 187 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 LIPHQ8WWY8 451 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 C7orf34Q96L11 122 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 LRGUKQ96M69 825 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 THTPAQ9BU02 230 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 ULBP2Q9BZM5 246 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 PLEKHF2Q9H8W4 249 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 UBTD1Q9HAC8 227 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 INIPQ9NRY2 104 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 ST6GALNAC2Q9UJ37 374 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 ITGB1BP2Q9UKP3 347 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 TMEM5Q9Y2B1 443 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 RNF115Q9Y4L5 304 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 ALPK2Q86TB3 2170 aa16.23■□□□□ 0.19
PRPF40B-216ENST00000552301 CCDC168Q8NDH2 2452 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 A0A087WUU8 490 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 A0A1W2PR80 420 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 A0A1W2PRQ8 180 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 EFCAB9A8MZ26 197 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 CLOCKO15516 846 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 DIRAS1O95057 198 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 ATP6V1B2P21281 511 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 AQP2P41181 271 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 DAP3P51398 398 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 PRPS1P60891 318 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 UBE2NP61088 152 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 PRKCDQ05655 676 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 DGCR6Q14129 220 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 KEAP1Q14145 624 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 TRIM25Q14258 630 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 MELKQ14680 651 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 CEACAM16Q2WEN9 425 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 C1QTNF12Q5T7M4 302 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 C20orf196Q8IYI0 205 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 OR1K1Q8NGR3 316 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 OR6X1Q8NH79 312 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 NINJ1Q92982 152 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 LRR1Q96L50 414 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 TRIM15Q9C019 465 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 NDEL1Q9GZM8 345 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 CRLF2Q9HC73 371 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 GPR35Q9HC97 309 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 OBP2BQ9NPH6 170 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 STX18Q9P2W9 335 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 PLEKHA6Q9Y2H5 1048 aa16.22■□□□□ 0.19
PRPF40B-216ENST00000552301 SLC25A15Q9Y619 301 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms