RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 TMEM120AQ9BXJ8 343 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 CA10Q9NS85 328 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 MED29Q9NX70 200 aa14.21□□□□□ -0.13
VPS29-207ENST00000549970 MRPL39Q9NYK5 338 aaKnown RBP14.21□□□□□ -0.13
VPS29-207ENST00000549970 CHD3Q12873 2000 aaKnown RBP14.2□□□□□ -0.14
VPS29-207ENST00000549970 SLC35F4A4IF30 521 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 FBP2O00757 339 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 CHP2O43745 196 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 CD5LO43866 347 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 GPRIN2O60269 458 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 FMO6PO60774 539 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 IGKV3-15P01624 115 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 IGLV1-44P01699 117 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 C8BP07358 591 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 CALCRP30988 508 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 PCGF2P35227 344 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 IDH3GP51553 393 aaPredicted RBP14.2□□□□□ -0.14
VPS29-207ENST00000549970 PUDPQ08623 228 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 NPRL3Q12980 569 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 SWI5Q1ZZU3 235 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 MST1LQ2TV78 715 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 METTL21CQ5VZV1 264 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 PATL1Q86TB9 770 aaKnown RBP14.2□□□□□ -0.14
VPS29-207ENST00000549970 MYPOPQ86VE0 399 aaPredicted RBP14.2□□□□□ -0.14
VPS29-207ENST00000549970 SLC30A8Q8IWU4 369 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 OR4D11Q8NGI4 311 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 FAM168AQ92567 244 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 TAMM41Q96BW9 452 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 TXNDC15Q96J42 360 aa14.2□□□□□ -0.14
VPS29-207ENST00000549970 MOV10Q9HCE1 1003 aaKnown RBP14.2□□□□□ -0.14
VPS29-207ENST00000549970 ZNF503-AS2A6NEH8 195 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 KIAA1324LA8MWY0 1029 aaPredicted RBP14.19□□□□□ -0.14
VPS29-207ENST00000549970 ZNF99A8MXY4 864 aaPredicted RBP14.19□□□□□ -0.14
VPS29-207ENST00000549970 C11orf98E9PRG8 122 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 PLPP3O14495 311 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 CRLF1O75462 422 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 CBR1P16152 277 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 CD247P20963 164 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 SERPINF1P36955 418 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 EFNA4P52798 201 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 SNRPD2P62316 118 aaKnown RBP14.19□□□□□ -0.14
VPS29-207ENST00000549970 CAMK2DQ13557 499 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 TRMT5Q32P41 509 aaKnown RBP14.19□□□□□ -0.14
VPS29-207ENST00000549970 C3orf36Q3SXR2 165 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 INTS11Q5TA45 600 aaKnown RBP14.19□□□□□ -0.14
VPS29-207ENST00000549970 NANOGP8Q6NSW7 305 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 LINC00114Q6XXX2 140 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 WDR88Q6ZMY6 472 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 WDFY1Q8IWB7 410 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 C20orf196Q8IYI0 205 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 OR5J2Q8NH18 312 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 ADAMTS16Q8TE57 1224 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 NANOGQ9H9S0 305 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 YAE1D1Q9NRH1 226 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 ADAM21Q9UKJ8 722 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 NOX1Q9Y5S8 564 aa14.19□□□□□ -0.14
VPS29-207ENST00000549970 A0A096LNT2 108 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 ZNF726A6NNF4 738 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 KPNA4O00629 521 aaPredicted RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 TLX2O43763 284 aaPredicted RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 MT-ATP6P00846 226 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 THY1P04216 161 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 OR4A8P0C604 315 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 ADORA3P0DMS8 318 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 TROVE2P10155 538 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS29-207ENST00000549970 GZMMP51124 257 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 CYLC2Q14093 348 aaPredicted RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 VMACQ2NL98 169 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 MMEL1Q495T6 779 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 RABL3Q5HYI8 236 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 TTC33Q6PID6 262 aaPredicted RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 SLC46A3Q7Z3Q1 461 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 PXKQ7Z7A4 578 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 MDP1Q86V88 176 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 TSPYL5Q86VY4 417 aaPredicted RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 FAM169BQ8N8A8 192 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 OR6N1Q8NGY5 312 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 NANOS1Q8WY41 292 aaKnown RBP14.18□□□□□ -0.14
VPS29-207ENST00000549970 SORCS2Q96PQ0 1159 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 B3GAT2Q9NPZ5 323 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 SLC7A7Q9UM01 511 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 USP22Q9UPT9 525 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 FKBP7Q9Y680 259 aa14.18□□□□□ -0.14
VPS29-207ENST00000549970 TRAPPC13A5PLN9 417 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 B9A039 149 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 OR6A2O95222 327 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 LYPD3O95274 346 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 CH25HO95992 272 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 F12P00748 615 aaPredicted RBP14.17□□□□□ -0.14
VPS29-207ENST00000549970 SLC25A16P16260 332 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 ARR3P36575 388 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 ARFIP2P53365 341 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 CRYBA2P53672 197 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 ADIPOQQ15848 244 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 ZNF74Q16587 644 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 TMEM249Q2WGJ8 235 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 REP15Q6BDI9 236 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 NHLRC1Q6VVB1 395 aa14.17□□□□□ -0.14
VPS29-207ENST00000549970 ZNF813Q6ZN06 617 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms