RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 SCARF2Q96GP6 870 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 C1QTNF6Q9BXI9 259 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 NRIP3Q9NQ35 241 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 PCOLCE2Q9UKZ9 415 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 A0A0G2JK05 382 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 CPED1A4D0V7 1026 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 PIN1P1O15428 100 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ANXA3P12429 323 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 DIO1P49895 249 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 TSPAN5P62079 268 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ST3GAL2Q16842 350 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 LANCL3Q6ZV70 420 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 FTMTQ8N4E7 242 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 OR11H4Q8NGC9 324 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 CTHRC1Q96CG8 243 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 OMA1Q96E52 524 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 AMELYQ99218 206 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 V9GY05 133 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 PCNX3Q9H6A9 2034 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 A0A087WUJ7 227 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CIB4A0PJX0 185 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 H0YIG0 161 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF264O43296 627 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 OR7A10O76100 309 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 AKR7A3O95154 331 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 PLCXD2Q0VAA5 305 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 I3L521 148 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CDK2P24941 298 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 BLVRAP53004 296 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 GNG2P59768 71 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 ZMYND11Q15326 602 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 YIF1BQ5BJH7 314 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 WDR89Q96FK6 387 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 S100A16Q96FQ6 103 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 MGAT4CQ9UBM8 478 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 TRAV18A0A075B6X5 111 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 J3QRE1 110 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 KDM4BO94953 1096 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 ALDOBP05062 364 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CFL1P23528 166 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 HLA-DMAP28067 261 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 MRPS21P82921 87 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 DUSP18Q8NEJ0 188 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 OR5M1Q8NGP8 315 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CCDC120Q96HB5 630 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 C5orf34Q96MH7 638 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 DDOQ99489 341 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CDCA3Q99618 268 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 B3GNT4Q9C0J1 378 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 CLEC4MQ9H2X3 399 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF281Q9Y2X9 895 aa12.44□□□□□ -0.42
PRPF40B-209ENST00000548825 SPTBN2O15020 2390 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 ITGA10O75578 1167 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 UBL3O95164 117 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 C1QBP02746 253 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 RPS4Y1P22090 263 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 RAD52P43351 418 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 LRRC37A5PQ49AS3 106 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 NDUFAF7Q7L592 441 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 ELMOD2Q8IZ81 293 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 FCAMRQ8WWV6 532 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 ELOVL3Q9HB03 270 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 CUTCQ9NTM9 273 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 PHF3Q92576 2039 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 CD14P08571 375 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 GPR3P46089 330 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 ELOCQ15369 112 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 PCGF3Q3KNV8 242 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC36A2Q495M3 483 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC6A19Q695T7 634 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 Q6ZTK2 550 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 NTMQ9P121 344 aa12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 CGGBP1Q9UFW8 167 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-209ENST00000548825 NUP210Q8TEM1 1887 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 IFITM5A6NNB3 132 aa12.42□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF593O00488 134 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms