RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 C1orf229Q6ZS94 237 aaPredicted RBP14.5□□□□□ -0.09
VPS29-204ENST00000548259 ZNF621Q6ZSS3 439 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 KIF18AQ8NI77 898 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 EPS8L3Q8TE67 593 aaKnown RBP14.5□□□□□ -0.09
VPS29-204ENST00000548259 TIMD4Q96H15 378 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 MS4A3Q96HJ5 214 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 OR2M2Q96R28 347 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 ZMAT3Q9HA38 289 aaKnown RBP14.5□□□□□ -0.09
VPS29-204ENST00000548259 B3GNT2Q9NY97 397 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 RPS6KB2Q9UBS0 482 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 CORINQ9Y5Q5 1042 aa14.5□□□□□ -0.09
VPS29-204ENST00000548259 A0A0G2JK05 382 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 ZNF503-AS2A6NEH8 195 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 PLPP2O43688 288 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 RP2O75695 350 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 SEC14L2O76054 403 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 UBL3O95164 117 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 MT-ND5P03915 603 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 MYZAPP0CAP1 466 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 NAT2P11245 290 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 ZNF14P17017 642 aaPredicted RBP14.49□□□□□ -0.09
VPS29-204ENST00000548259 MVKQ03426 396 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 PIGFQ07326 219 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 MOGQ16653 247 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 ZNF836Q6ZNA1 936 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
VPS29-204ENST00000548259 NET1Q7Z628 596 aaPredicted RBP14.49□□□□□ -0.09
VPS29-204ENST00000548259 RETREG3Q86VR2 466 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 VRK2Q86Y07 508 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 KIRREL3Q8IZU9 778 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 LRR1Q96L50 414 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 PPP1R36Q96LQ0 422 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 TMPRSS13Q9BYE2 586 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 C7orf69Q9H7B7 122 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 HINT3Q9NQE9 182 aaKnown RBP14.49□□□□□ -0.09
VPS29-204ENST00000548259 SLC17A7Q9P2U7 560 aa14.49□□□□□ -0.09
VPS29-204ENST00000548259 ZNF443Q9Y2A4 671 aaPredicted RBP14.49□□□□□ -0.09
VPS29-204ENST00000548259 DSPPQ9NZW4 1301 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 LOC102725191A0A1B0GVB3 256 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 TLDC2A0PJX2 215 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 CLDN25C9JDP6 229 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 FTCDNL1E5RQL4 147 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 TPD52L2O43399 206 aaKnown RBP14.48□□□□□ -0.09
VPS29-204ENST00000548259 PRSS23O95084 383 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 ARRB2P32121 409 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 RAB1AP62820 205 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 ZP4Q12836 540 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 CAMK2DQ13557 499 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 MFSD13AQ14CX5 517 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 PDCD4Q53EL6 469 aaKnown RBP14.48□□□□□ -0.09
VPS29-204ENST00000548259 FAM69AQ5T7M9 428 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 RGS7BPQ6MZT1 257 aaPredicted RBP14.48□□□□□ -0.09
VPS29-204ENST00000548259 UEVLDQ8IX04 471 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 ZDHHC22Q8N966 263 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 RAB1CQ92928 201 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 SLC38A4Q969I6 547 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 ZNF837Q96EG3 531 aaPredicted RBP14.48□□□□□ -0.09
VPS29-204ENST00000548259 RHOXF2Q9BQY4 288 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 SPATA9Q9BWV2 254 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 SLCO1C1Q9NYB5 712 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 B3GAT1Q9P2W7 334 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 FZR1Q9UM11 496 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 IFT52Q9Y366 437 aa14.48□□□□□ -0.09
VPS29-204ENST00000548259 POM121CA8CG34 1229 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 C17orf100A8MU93 164 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 M0R082 166 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 CDC14BO60729 498 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 NCR1O76036 304 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 AVPP01185 164 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 NQO1P15559 274 aaKnown RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 ADRA2CP18825 462 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 GIPRP48546 466 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 CHI3L2Q15782 390 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 FXNQ16595 210 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 MSMPQ1L6U9 139 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 MIDNQ504T8 468 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 CARD17Q5XLA6 110 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 ZNF627Q7L945 461 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 LRP11Q86VZ4 500 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 C20orf196Q8IYI0 205 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 TMEM123Q8N131 208 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 EIF1ADQ8N9N8 165 aaKnown RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 ADPRHL1Q8NDY3 354 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 OR6N1Q8NGY5 312 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 ZNF417Q8TAU3 575 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 PNPT1Q8TCS8 783 aaKnown RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 TCP10LQ8TDR4 215 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 SLC35B4Q969S0 331 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 KTI12Q96EK9 354 aaPredicted RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 ZNF587Q96SQ5 575 aaPredicted RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 ZBTB18Q99592 522 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 GPA33Q99795 319 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 PTDSS2Q9BVG9 487 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 ULBP2Q9BZM5 246 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 ESM1Q9NQ30 184 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 DECR2Q9NUI1 292 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 THUMPD1Q9NXG2 353 aaKnown RBP14.47□□□□□ -0.09
VPS29-204ENST00000548259 NKIRAS2Q9NYR9 191 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 TAAR3PQ9P1P4 343 aa14.47□□□□□ -0.09
VPS29-204ENST00000548259 PPIAL4AQ9Y536 164 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms