RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TPST1O60507 370 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 VENTXO95231 258 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 HPXP02790 462 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 ARAFP10398 606 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 ETS2P15036 469 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 NCF2P19878 526 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 PRKAR1BP31321 381 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 NPRL3Q12980 569 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 FADDQ13158 208 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 CCNIQ14094 377 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 DAG1Q14118 895 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 LRIF1Q5T3J3 769 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 DHRS4L2Q6PKH6 230 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 SLC2A7Q6PXP3 512 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 C5orf46Q6UWT4 87 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 LRP11Q86VZ4 500 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 CCDC36Q8IYA8 594 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 GPR137CQ8N3F9 429 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 PIK3C3Q8NEB9 887 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 OR6S1Q8NH40 331 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 CLDND2Q8NHS1 167 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 BBS10Q8TAM1 723 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 YIPF5Q969M3 257 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 ITCHQ96J02 903 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 LRR1Q96L50 414 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 ZBTB18Q99592 522 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 IKZF5Q9H5V7 419 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 THAP1Q9NVV9 213 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 THUMPD1Q9NXG2 353 aaKnown RBP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 TMEFF2Q9UIK5 374 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 USP22Q9UPT9 525 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
COPS7A-221ENST00000546229 TRAV36DV7A0A075B6V5 113 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 A0A087WUJ7 227 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 A0A0B4J2E0 115 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 A0A1B0GX12 115 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 TRPC5OSA6NMA1 111 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 SYNGR3O43761 229 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 MFSD13AQ14CX5 517 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 FAM91A1Q658Y4 838 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 H1FNTQ75WM6 255 aaPredicted RBP10.78□□□□□ -0.68
COPS7A-221ENST00000546229 FUNDC1Q8IVP5 155 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 SCAIQ8N9R8 606 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 FGFBP3Q8TAT2 258 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 ZBTB9Q96C00 473 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 EMC6Q9BV81 110 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 MED29Q9NX70 200 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 SLAMF8Q9P0V8 285 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 RAB21Q9UL25 225 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 SPEF1Q9Y4P9 236 aa10.78□□□□□ -0.68
COPS7A-221ENST00000546229 DYSFO75923 2080 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM120BA0PK00 339 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 LRRN3E7EW58 273 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 M0R3G1 203 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 HAX1O00165 279 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 CLIC1O00299 241 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 OR2T1O43869 369 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 LYPD3O95274 346 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 KITP10721 976 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 IFNGR1P15260 489 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 B4GALT1P15291 398 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 GLRXP35754 106 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 POLR2JP52435 117 aaKnown RBP10.77□□□□□ -0.69
COPS7A-221ENST00000546229 SEC24CP53992 1094 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 LMO4P61968 165 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 MAD2L1BPQ15013 274 aaPredicted RBP10.77□□□□□ -0.69
COPS7A-221ENST00000546229 GSG1Q2KHT4 349 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 ALG10BQ5I7T1 473 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 CEP85LQ5SZL2 805 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 LIPNQ5VXI9 398 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 WDR88Q6ZMY6 472 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 RINLQ6ZS11 566 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 TSPYL5Q86VY4 417 aaPredicted RBP10.77□□□□□ -0.69
COPS7A-221ENST00000546229 IL17RDQ8NFM7 739 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 MRPL39Q9NYK5 338 aaKnown RBP10.77□□□□□ -0.69
COPS7A-221ENST00000546229 TESQ9UGI8 421 aaKnown RBP10.77□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF232Q9UNY5 417 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 CMAHPQ9Y471 501 aa10.77□□□□□ -0.69
COPS7A-221ENST00000546229 SH3PXD2BA1X283 911 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 M0R233 179 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 THY1P04216 161 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 ACHEP22303 614 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 CBLP22681 906 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 COL8A2P25067 703 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 CFPP27918 469 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 ALDH3B1P43353 468 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 COMPP49747 757 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 SLC18A1P54219 525 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 AQP5P55064 265 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 MRPS11P82912 194 aaKnown RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 PUDPQ08623 228 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 C6orf10Q5SRN2 563 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 CARD17Q5XLA6 110 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms