RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FBXL14Q8N1E6 418 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 DEPDC4Q8N2C3 294 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MAPK1IP1LQ8NDC0 245 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ADAMTS16Q8TE57 1224 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SLC38A2Q96QD8 506 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 EMC6Q9BV81 110 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 REG4Q9BYZ8 158 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ALG2Q9H553 416 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CRLF2Q9HC73 371 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SELENONQ9NZV5 590 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 POU2F3Q9UKI9 436 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MOKQ9UQ07 419 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ATP23Q9Y6H3 246 aa11.41□□□□□ -0.58
TNFRSF1A-215ENST00000543359 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 A0A096LNT2 108 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 LOC100653049A0A140TA62 436 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SLC35F4A4IF30 521 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TRAPPC13A5PLN9 417 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CPSF4LA6NMK7 179 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 KRT34O76011 436 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CECR9P0C854 216 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 PAX7P23759 505 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 APOBEC3AP31941 199 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 PMS2P3Q13401 168 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 VEZF1Q14119 521 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ZNF74Q16587 644 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CEACAM16Q2WEN9 425 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 INTS11Q5TA45 600 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 KLHL24Q6TFL4 600 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ZNF627Q7L945 461 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SNX32Q86XE0 403 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 UEVLDQ8IX04 471 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 PIK3C3Q8NEB9 887 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OR5J2Q8NH18 312 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 VANGL1Q8TAA9 524 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 RNF217Q8TC41 542 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 C10orf82Q8WW14 230 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 LRR1Q96L50 414 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SH3GL1Q99961 368 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ASPNQ9BXN1 380 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 FKRPQ9H9S5 495 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MEPEQ9NQ76 525 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MRGBPQ9NV56 204 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MED29Q9NX70 200 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 B3GNT2Q9NY97 397 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TAS2R5Q9NYW4 299 aa11.4□□□□□ -0.58
TNFRSF1A-215ENST00000543359 RTTNQ86VV8 2226 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 BBIP1A8MTZ0 92 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF99A8MXY4 864 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 H7C417 338 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 M0R3G1 203 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MRASO14807 208 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 VIMP08670 466 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CELA3BP08861 270 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NQO1P15559 274 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CBR1P16152 277 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CALCRP30988 508 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 UBE2NP61088 152 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NAAAQ02083 359 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 POU3F1Q03052 451 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 HGFACQ04756 655 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZP4Q12836 540 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 GPR137CQ8N3F9 429 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LRRC17Q8N6Y2 441 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MPP4Q96JB8 637 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF75AQ96N20 296 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ECSITQ9BQ95 431 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 KATNB1Q9BVA0 655 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC19A3Q9BZV2 496 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 BARX1Q9HBU1 254 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF224Q9NZL3 707 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC7A7Q9UM01 511 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NOX1Q9Y5S8 564 aa11.39□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC22A2O15244 555 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SSX4O60224 188 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CH25HO95992 272 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ASAH2BP0C7U1 165 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CAMK2DQ13557 499 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MAPRE2Q15555 327 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MMEL1Q495T6 779 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC46A3Q7Z3Q1 461 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CARM1Q86X55 608 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 C10orf53Q8N6V4 93 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RASSF5Q8WWW0 418 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 HTRA1Q92743 480 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TMEM54Q969K7 222 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ADAD1Q96M93 576 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NOX3Q9HBY0 568 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CA10Q9NS85 328 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CMTM6Q9NX76 183 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ARMCX1Q9P291 453 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF229Q9UJW7 825 aa11.38□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SH3GLB1Q9Y371 365 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms