RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 NUFIP2Q7Z417 695 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SERPINA11Q86U17 422 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CATSPERDQ86XM0 798 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PTOV1Q86YD1 416 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 GLB1L2Q8IW92 636 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 H1FOOQ8IZA3 346 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 C1orf87Q8N0U7 546 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 HIST3H2BBQ8N257 126 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 KCNRGQ8N5I3 272 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CCDC71LQ8N9Z2 235 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SLC38A9Q8NBW4 561 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM161BQ8NDZ6 487 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR4E2Q8NGC2 313 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR51G2Q8NGK0 314 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR14L1PQ8NHC6 308 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 HMGCLL1Q8TB92 370 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FEZF2Q8TBJ5 459 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 RNASE8Q8TDE3 154 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TBCKQ8TEA7 893 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 LRRC15Q8TF66 581 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR8D1Q8WZ84 308 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SEMA4DQ92854 862 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 MRGPRFQ96AM1 343 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ALKBH3Q96Q83 286 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR5B2Q96R09 309 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 DDOQ99489 341 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SEPHS2Q99611 448 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 NRIP2Q9BQI9 281 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ALKBH7Q9BT30 221 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CACNG6Q9BXT2 260 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ACTRT3Q9BYD9 372 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TBL1XR1Q9BZK7 514 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM117Q9H0C3 514 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TLNRD1Q9H1K6 362 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 OR10A5Q9H207 317 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 BCAS3Q9H6U6 928 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ACTR8Q9H981 624 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 SMURF2Q9HAU4 748 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 LPAR2Q9HBW0 351 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ADGRL4Q9HBW9 690 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 DNAJC4Q9NNZ3 241 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 UBE2TQ9NPD8 197 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FZD3Q9NPG1 666 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 EXOSC3Q9NQT5 275 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CYSLTR2Q9NS75 346 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CUTCQ9NTM9 273 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZCCHC3Q9NUD5 404 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 RBM22Q9NW64 420 aaKnown RBP eCLIP3.98□□□□□ -1.771e-8■■■□□ 18.1
SNHG1-219ENST00000542112 P4HTMQ9NXG6 502 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CLEC5AQ9NY25 188 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TAS2R5Q9NYW4 299 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 FOXJ2Q9P0K8 574 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 IL17BQ9UHF5 180 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 AJAP1Q9UKB5 411 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 COQ4Q9Y3A0 265 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 PKP3Q9Y446 797 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 CHST2Q9Y4C5 530 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 UBIAD1Q9Y5Z9 338 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 RBBP6Q7Z6E9 1792 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF638Q14966 1978 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 DDX60LQ5H9U9 1706 aaKnown RBP3.98□□□□□ -1.77
SNHG1-219ENST00000542112 EP400Q96L91 3159 aa3.98□□□□□ -1.77
SNHG1-219ENST00000542112 TRAV30A0A087WSZ9 112 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 A0A087WWC5 75 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 A0A087X1B8 175 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 A0A096LPK6 155 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA5A0A0B4J1W7 369 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 KIR2DL5BA0A0G2JN68 375 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 KIR2DL5BA0A0G2JPC4 375 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TRBC2A0A5B9 178 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF320A2RRD8 509 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF726A6NNF4 738 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HSPB2A8KAH6 182 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA5E9PKD4 350 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA3F8WFD2 350 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IRAK2O43187 625 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 B4GALT5O43286 388 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 BCL2L11O43521 198 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NARSO43776 548 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 RAMP3O60896 148 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MOSPD3O75425 235 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SIX3O95343 332 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SIX6O95475 246 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 METTL18O95568 372 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 LSM8O95777 96 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CYB5R3P00387 301 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CLEC3BP05452 202 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ANXA2P07355 339 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HOXC6P09630 235 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 RD3LP0DJH9 198 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR5H8P0DN80 308 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SNHG28P0DPA3 235 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SLC25A4P12235 298 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF35P13682 527 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ADCYAP1P18509 176 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CSNK2A2P19784 350 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SERPINA2P20848 420 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 BMP5P22003 454 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms