RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CSTAP01040 98 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 HMGN1P05114 100 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L2P0CJ85 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L3P0CJ86 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L4P0CJ87 422 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L5P0CJ88 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L6P0CJ89 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4L7P0CJ90 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RNH1P13489 461 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 SNRPBP14678 240 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 PPP3CBP16298 524 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 CD53P19397 219 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NFYBP25208 207 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 S100A11P31949 105 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SFTPDP35247 375 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 STAT5AP42229 794 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 KHKP50053 298 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RAB13P51153 203 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SLC3A1Q07837 685 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 HTR4Q13639 388 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GK2Q14410 553 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 ABHD17BQ5VST6 288 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 SLC25A25Q6KCM7 469 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 FAAP20Q6NZ36 180 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NXPE4Q6UWF7 544 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ETV3LQ6ZN32 361 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PDZD9Q8IXQ8 264 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GJD3Q8N144 294 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SPICQ8N5J4 248 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 TRAM1L1Q8N609 369 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ZNF454Q8N9F8 522 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 AVL9Q8NBF6 648 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 OR5T2Q8NGG2 359 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SMIM4Q8WVI0 70 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NR4A3Q92570 626 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RSRP1Q9BUV0 290 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 UNKLQ9H9P5 680 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 HINT3Q9NQE9 182 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 CA10Q9NS85 328 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 FAM86C1Q9NVL1 165 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ABRACLQ9P1F3 81 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 CKLFQ9UBR5 152 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DUX4Q9UBX2 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ZNF69Q9UC07 566 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PIEZO1Q92508 2521 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SLC5A10A0PJK1 596 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PRAMEF27A3QJZ7 478 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 OR6C68A6NDL8 312 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 MCRIP1C9JLW8 97 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 C5orf67F2Z3F1 127 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SULT1C2O00338 296 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GPR37O15354 613 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 BCAT2O15382 392 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 SUSD5O60279 629 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ICOSLGO75144 302 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SPDEFO95238 335 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SLC2A10O95528 541 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 MT-ND5P03915 603 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GP1BBP13224 206 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NPPBP16860 134 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PSMB1P20618 241 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 FBLP22087 321 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 RAB28P51157 221 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 TAS2R43P59537 309 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SKP2Q13309 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 FZD5Q13467 585 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 HLXQ14774 488 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 ZNF658BQ4V348 819 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 B3GNTL1Q67FW5 361 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 OLFML2AQ68BL7 652 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 SEZ6L2Q6UXD5 910 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 LINGO2Q7L985 606 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ADIPOR2Q86V24 386 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 C12orf40Q86WS4 652 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 CPOQ8IVL8 374 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NAXDQ8IW45 347 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 OR6V1Q8N148 313 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 TMEM99Q8N816 258 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RASGEF1AQ8N9B8 481 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NSMAFQ92636 917 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RSPRY1Q96DX4 576 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 MRGPRX3Q96LB0 322 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PDCD10Q9BUL8 212 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 APOOQ9BUR5 198 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PAPOLGQ9BWT3 736 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 TMPRSS13Q9BYE2 586 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GPN1Q9HCN4 374 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 NPDC1Q9NQX5 325 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 PRMT8Q9NR22 394 aaPredicted RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 MED11Q9P086 117 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 IL20RAQ9UHF4 553 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 PTRH2Q9Y3E5 179 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 NPFFR2Q9Y5X5 522 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NAP1L6A6NFF2 107 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 A6NLC8 198 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 G3V3Y1 287 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 H3BML4 177 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms