RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ATXN7L1Q9ULK2 861 aaPredicted RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 MRPS33Q9Y291 106 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 NPFFR2Q9Y5X5 522 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 NUBP2Q9Y5Y2 271 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 TNFRSF10CO14798 259 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 MMP15P51511 669 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 EGR4Q05215 589 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 LINC01590Q5TEZ4 76 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ZCCHC12Q6PEW1 402 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CHMP1BQ7LBR1 199 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 MARCH3Q86UD3 253 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 FTMTQ8N4E7 242 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 OR11G2Q8NGC1 345 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 NSMAFQ92636 917 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CA10Q9NS85 328 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 PCDHGA9Q9Y5G4 932 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 V9GY05 133 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 IGHV3-20A0A0C4DH32 117 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 CTNSO60931 367 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ICOSLGO75144 302 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 RGS11O94810 467 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 KDM4BO94953 1096 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 EFNB2P52799 333 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 POU4F2Q12837 409 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 LGALSLQ3ZCW2 172 aaPredicted RBP12.42□□□□□ -0.42
BNIP3-202ENST00000540159 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 DPY19L2P2Q6ZN68 376 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 OR4D10Q8NGI6 311 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 OR5AK2Q8NH90 309 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 FAM131CQ96AQ9 280 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 HAO2Q9NYQ3 351 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 SLC22A13Q9Y226 551 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF281Q9Y2X9 895 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 FRYQ5TBA9 3013 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ANXA2P2A6NMY6 339 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 PRAMEF26H0Y7S4 382 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 OPN1LWP04000 364 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 RLN1P04808 185 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ALDOBP05062 364 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ANXA2P07355 339 aaKnown RBP12.42□□□□□ -0.42
BNIP3-202ENST00000540159 GALP22466 123 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 RABIFP47224 123 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 P2RX3P56373 397 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 KLF9Q13886 244 aaPredicted RBP12.42□□□□□ -0.42
BNIP3-202ENST00000540159 LINC00303Q3SY05 128 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF680Q8NEM1 530 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 TAAR8Q969N4 342 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 MRPL38Q96DV4 380 aaKnown RBP12.42□□□□□ -0.42
BNIP3-202ENST00000540159 KLHDC7BQ96G42 594 aa12.42□□□□□ -0.42
BNIP3-202ENST00000540159 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
BNIP3-202ENST00000540159 I3L521 148 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 SCDO00767 359 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PROS1P07225 676 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 UBL4AP11441 157 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PTBP1P26599 531 aaKnown RBP eCLIP12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CD1CP29017 333 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CCKBRP32239 447 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CCR9P51686 369 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 NR0B1P51843 470 aaKnown RBP12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TSPAN5P62079 268 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MELKQ14680 651 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TRAM1Q15629 374 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MESTQ5EB52 335 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TMEM184AQ6ZMB5 413 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 SMIM4Q8WVI0 70 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TSEN15Q8WW01 171 aaKnown RBP12.41□□□□□ -0.42
BNIP3-202ENST00000540159 G6PC3Q9BUM1 346 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 OR11A1Q9GZK7 315 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 S1PR5Q9H228 398 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TAS2R10Q9NYW0 307 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 KIR2DS5A0A0G2JLQ3 304 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 A0A0G2JNG1 304 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 KIR2DS3K7RE56 304 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MPC2O95563 127 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 BTG1P62324 171 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PITPNAQ00169 270 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 KIR2DS5Q14953 304 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF74Q16587 644 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 UBE2NLQ5JXB2 153 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 LINC00114Q6XXX2 140 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PRR23CQ6ZRP0 262 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 GPR119Q8TDV5 335 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MAP6Q96JE9 813 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 ABRACLQ9P1F3 81 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MGAT4CQ9UBM8 478 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 ICAM5Q9UMF0 924 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 BAIAP2Q9UQB8 552 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CAMK2AQ9UQM7 478 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TRAV1-2A0A0B4J238 106 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms