RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 AICDAQ9GZX7 198 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF281Q9Y2X9 895 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 HEATR5BQ9P2D3 2071 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 A0A1B0GWA3 101 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PRR19A6NJB7 356 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 C17orf105B2RV13 164 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 P2RX6O15547 441 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PRAMEF2O60811 474 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 LGI1O95970 557 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 C1QBP02746 253 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 GZMKP49863 264 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 HERV-K104P61576 105 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 MC2RQ01718 297 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TNFRSF17Q02223 184 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 EIF2B1Q14232 305 aaKnown RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TRMT12Q53H54 448 aaKnown RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 VASNQ6EMK4 673 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TSSK4Q6SA08 328 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM151BQ8IW70 566 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF565Q8N9K5 539 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ACBD4Q8NC06 268 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 OR51D1Q8NGF3 324 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PFN4Q8NHR9 129 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PGAM5Q96HS1 289 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TEAD3Q99594 435 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PHB2Q99623 299 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 SRRQ9GZT4 340 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ELOVL3Q9HB03 270 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ACKR4Q9NPB9 350 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 NDUFB11Q9NX14 153 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 A0A1W2PS29 197 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 HTR3BO95264 441 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 GLP1RP43220 463 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 DGCR2P98153 550 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 FAM189A2Q15884 450 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PHF19Q5T6S3 580 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 FAAP20Q6NZ36 180 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RPL22L1Q6P5R6 122 aaKnown RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 BPIFB2Q8N4F0 458 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 GCDHQ92947 438 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ZBTB8AQ96BR9 441 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 OR2A5Q96R48 311 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 OR1F2PQ96R84 312 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ALG12Q9BV10 488 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ST6GALNAC5Q9BVH7 336 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ULBP3Q9BZM4 244 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 IGHV1OR15-9A0A0B4J2B8 117 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 OR5K3A6NET4 321 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 CHP2O43745 196 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 CD27P26842 260 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RORAP35398 523 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RPS27P42677 84 aaKnown RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PPP1CAP62136 330 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MAT1AQ00266 395 aaKnown RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 GPR50Q13585 617 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 TCEAL6Q6IPX3 200 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF585AQ6P3V2 769 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 DENND4AQ7Z401 1863 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PSD2Q9BQI7 771 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SCN3AQ9NY46 2000 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 A6NCN8 305 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 H7C417 338 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PEX12O00623 359 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SNAPC5O75971 98 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 CSF1P09603 554 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 M6PRP20645 277 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 FPR3P25089 353 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 EVX1P49640 407 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 CRYBA2P53672 197 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 UBE2MP61081 183 aaKnown RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 INSL4Q14641 139 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MFSD13AQ14CX5 517 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 DEFB133Q30KQ1 61 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 FCRL6Q6DN72 434 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MRM1Q6IN84 353 aaKnown RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 RFPL4BQ6ZWI9 263 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 IL17RDQ8NFM7 739 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 BAHD1Q8TBE0 780 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ELP5Q8TE02 316 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SFXN2Q96NB2 322 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 LRRC61Q9BV99 259 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SMIM3Q9BZL3 60 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 GSX2Q9BZM3 304 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PTGES2Q9H7Z7 377 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 LIN7BQ9HAP6 207 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 APMAPQ9HDC9 416 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 FAM221BA6H8Z2 402 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SBK2P0C263 348 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 IL9P15248 144 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 PCMT1P22061 227 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ADH6P28332 368 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 GNRHRP30968 328 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms