RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FAM166BA8MTA8 275 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 C17orf112F2Z3M2 114 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 BOLA2-SMG1P6H3BVE0 249 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 NKX2-5P52952 324 aaPredicted RBP15.53■□□□□ 0.08
SCARB1-205ENST00000538291 MFGE8Q08431 387 aaPredicted RBP15.53■□□□□ 0.08
SCARB1-205ENST00000538291 C1orf140Q5VVS0 124 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 METRNLQ641Q3 311 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 ANKRD33Q7Z3H0 272 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 LINC00346Q8IVM7 164 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 TMEM185AQ8NFB2 350 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 RBMXL1Q96E39 390 aaKnown RBP15.53■□□□□ 0.08
SCARB1-205ENST00000538291 ELP4Q96EB1 424 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 NRIP3Q9NQ35 241 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 CRYBG1Q9Y4K1 1723 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 MT-ATP6P00846 226 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 RAB6AP20340 208 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 PTAFRP25105 342 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 GABRB3P28472 473 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 SLC1A3P43003 542 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 RPS23P62266 143 aaKnown RBP15.53■□□□□ 0.08
SCARB1-205ENST00000538291 SMAD4Q13485 552 aaKnown RBP15.53■□□□□ 0.08
SCARB1-205ENST00000538291 GJC3Q8NFK1 279 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 RPS10P5Q9NQ39 176 aa15.53■□□□□ 0.08
SCARB1-205ENST00000538291 TARM1B6A8C7 271 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 NPPBP16860 134 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 LIM2P55344 173 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 FOXK2Q01167 660 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 TBPL2Q6SJ96 375 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 SYT13Q7L8C5 426 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 GRINAQ7Z429 371 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 SLC43A2Q8N370 569 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 SLC22A24Q8N4F4 322 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 LIPHQ8WWY8 451 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 ZC3HAV1LQ96H79 300 aaKnown RBP15.52■□□□□ 0.08
SCARB1-205ENST00000538291 MBNL1Q9NR56 388 aaKnown RBP15.52■□□□□ 0.08
SCARB1-205ENST00000538291 LUZP4Q9P127 313 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 MYH1P12882 1939 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 P2RY10O00398 339 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 SPINT2O43291 252 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 TUSC2O75896 110 aa15.52■□□□□ 0.08
SCARB1-205ENST00000538291 RBMXL3Q8N7X1 1067 aaKnown RBP15.52■□□□□ 0.08
SCARB1-205ENST00000538291 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.52■□□□□ 0.07
SCARB1-205ENST00000538291 KIR2DL3P43628 341 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 SRPXP78539 464 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 AKR1C1Q04828 323 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 HENMT1Q5T8I9 393 aaKnown RBP15.52■□□□□ 0.07
SCARB1-205ENST00000538291 OR2T11Q8NH01 316 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 CR2P20023 1033 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 NKX6-1P78426 367 aaPredicted RBP15.52■□□□□ 0.07
SCARB1-205ENST00000538291 CRMP1Q14194 572 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 HES1Q14469 280 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 RNLSQ5VYX0 342 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 AFMIDQ63HM1 303 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 CD300LGQ6UXG3 332 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 Q6ZTK2 550 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 H1FNTQ75WM6 255 aaPredicted RBP15.52■□□□□ 0.07
SCARB1-205ENST00000538291 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.07
SCARB1-205ENST00000538291 GRB2P62993 217 aaKnown RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 GDF7Q7Z4P5 450 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 HAS2Q92819 552 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 GHSRQ92847 366 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 UHRF2Q96PU4 802 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 STACQ99469 402 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 FAM234AQ9H0X4 552 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 GON4LQ3T8J9 2241 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 C4orf47A7E2U8 309 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CYP4V2Q6ZWL3 525 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CPEB3Q8NE35 698 aaKnown RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 C1orf123Q9NWV4 160 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CITO14578 2027 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 FZD7O75084 574 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A6P0DMU7 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A5P0DMU8 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A7P0DMV0 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A8P0DMV1 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A9P0DMV2 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 TNFSF8P32971 234 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A2Q5DJT8 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A1Q5HYN5 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 LILRA3Q8N6C8 439 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CT45A3Q8NHU0 189 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 WFDC5Q8TCV5 224 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 BARHL1Q9BZE3 327 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 SLA2Q9H6Q3 261 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 TMEM82A0PJX8 343 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 MED6O75586 246 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 SCAF4O95104 1147 aaKnown RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 PFN3P60673 137 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 NOXA1Q86UR1 476 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 SCCPDHQ8NBX0 429 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 C11orf40Q8WZ69 217 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 MUTYHQ9UIF7 546 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 IGHV3-20A0A0C4DH32 117 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 CHRNB1P11230 501 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 HMGA1P17096 107 aaKnown RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 BCKDHBP21953 392 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 ILKQ13418 452 aa15.51■□□□□ 0.07
SCARB1-205ENST00000538291 Q6ZPB1 254 aaPredicted RBP15.51■□□□□ 0.07
SCARB1-205ENST00000538291 GDPD3Q7L5L3 318 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms