RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ABTB1Q969K4 478 aaPredicted RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 CPNE4Q96A23 557 aaPredicted RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 ABHD17AQ96GS6 310 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 OXGR1Q96P68 337 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 LDAHQ9H6V9 325 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 MRPS18AQ9NVS2 196 aaKnown RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 PAK1IP1Q9NWT1 392 aaPredicted RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 B3GAT1Q9P2W7 334 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 TUBD1Q9UJT1 453 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 ZNF346Q9UL40 294 aaKnown RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 NPIPA1Q9UND3 350 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 B3GNT3Q9Y2A9 372 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 DCHS1Q96JQ0 3298 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 FREM3P0C091 2139 aa11.05□□□□□ -0.64
DDB1-209ENST00000537877 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
DDB1-209ENST00000537877 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 PTGES3LE9PB15 166 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 TAF4O00268 1085 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 RGS10O43665 173 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SERPINI2O75830 405 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 BCL10O95999 233 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 CLPTM1O96005 669 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 PLGP00747 810 aaPredicted RBP11.04□□□□□ -0.64
DDB1-209ENST00000537877 RENP00797 406 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 ENPP1P22413 925 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SLC2A5P22732 501 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 ACVR1BP36896 505 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 MTNR1AP48039 350 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 STARP49675 285 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SLC25A1P53007 311 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 CARD18P57730 90 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 RPS3AP61247 264 aaKnown RBP11.04□□□□□ -0.64
DDB1-209ENST00000537877 LGALS3BPQ08380 585 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 LCN1P1Q5VSP4 162 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 VASNQ6EMK4 673 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 TMEM225Q6GV28 225 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 LEG1Q6P5S2 330 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SLC35D2Q76EJ3 337 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 PRSS48Q7RTY5 328 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 BCDIN3DQ7Z5W3 292 aaKnown RBP11.04□□□□□ -0.64
DDB1-209ENST00000537877 SVOPQ8N4V2 548 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 CYB561A3Q8NBI2 242 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 OR10D3Q8NH80 312 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 ASB10Q8WXI3 467 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 GGHQ92820 318 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 OTULINQ96BN8 352 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SIGLEC11Q96RL6 698 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 DDOQ99489 341 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 RHNO1Q9BSD3 238 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
DDB1-209ENST00000537877 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 NMNAT2Q9BZQ4 307 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 EXO5Q9H790 373 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 AMBNQ9NP70 447 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
DDB1-209ENST00000537877 TP53TG5Q9Y2B4 290 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 SNX5Q9Y5X3 404 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 LIPGQ9Y5X9 500 aa11.04□□□□□ -0.64
DDB1-209ENST00000537877 MED19A0JLT2 244 aaPredicted RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 ZNF814B7Z6K7 855 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 H0YC42 278 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 SMAD9O15198 467 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 AHCYL1O43865 530 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 CXCL13O43927 109 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 CDK1P06493 297 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 HTR1AP08908 422 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 HLA-DOBP13765 273 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 IFNGR1P15260 489 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 ATP6V1B1P15313 513 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 ZNF43P17038 809 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 EIF1AXP47813 144 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 SUCLG1P53597 346 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 RAB40BQ12829 278 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 C1DQ13901 141 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 KLHL22Q53GT1 634 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 SLC35D3Q5M8T2 416 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 ABLIM2Q6H8Q1 611 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 STX19Q8N4C7 294 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 BBS1Q8NFJ9 593 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 PTP4A1Q93096 173 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 HCAR1Q9BXC0 346 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 DEFB127Q9H1M4 99 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 MED20Q9H944 212 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 A0A1B0GVC2 190 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 PRSS37A4D1T9 235 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 OR6C68A6NDL8 312 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 CCDC182A6NF36 153 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 K7EM74 188 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
DDB1-209ENST00000537877 AKAP8O43823 692 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 CRYABP02511 175 aaKnown RBP11.03□□□□□ -0.64
DDB1-209ENST00000537877 CPN1P15169 458 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms