RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 LYSMD4Q5XG99 296 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 KANSL1Q7Z3B3 1105 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 NANOGNBQ7Z5D8 188 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 C7orf57Q8NEG2 295 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 PDCD1LG2Q9BQ51 273 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 U3KQA8 63 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 TRBV2A0A0J9YWF9 115 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 A0A1W2PQM1 296 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 OR6C76A6NM76 312 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 EIF4E2O60573 245 aaKnown RBP12.13□□□□□ -0.47
VPS33B-202ENST00000535906 CPNE3O75131 537 aaKnown RBP12.13□□□□□ -0.47
VPS33B-202ENST00000535906 FOSL2P15408 326 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 AHCYP23526 432 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 BTG1P62324 171 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 EFR3AQ14156 821 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 PLA1AQ53H76 456 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 Q5BKY6 102 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 MESTQ5EB52 335 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 HACD4Q5VWC8 232 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 BICRALQ6AI39 1079 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 SYT9Q86SS6 491 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 TSPAN32Q96QS1 320 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 ABHD1Q96SE0 405 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 SMAD5Q99717 465 aaKnown RBP12.13□□□□□ -0.47
VPS33B-202ENST00000535906 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
VPS33B-202ENST00000535906 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 SRA1Q9HD15 236 aaKnown RBP12.13□□□□□ -0.47
VPS33B-202ENST00000535906 PRDM6Q9NQX0 595 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 GRHPRQ9UBQ7 328 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 SRPK3Q9UPE1 567 aa12.13□□□□□ -0.47
VPS33B-202ENST00000535906 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 FADS1O60427 444 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 TXNDC12O95881 172 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 C1QBP02746 253 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 EDNRAP25101 427 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 EVI2BP34910 448 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 GZMKP49863 264 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 SLC25A1P53007 311 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 RNF4P78317 190 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 C6orf183Q5T699 404 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 NUP54Q7Z3B4 507 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 DTX3Q8N9I9 347 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ZFAND1Q8TCF1 268 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ABCG5Q9H222 651 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 NIPAL2Q9H841 368 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 FKRPQ9H9S5 495 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 MCUBQ9NWR8 336 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 SLC6A5Q9Y345 797 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 A0A1B0GVC2 190 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 A6NIN4 97 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 NOTOA8MTQ0 251 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 EEF1E1O43324 174 aaKnown RBP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ARL6IP5O75915 188 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 BGLAPP02818 100 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 HIST1H2ABP04908 130 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 CD1AP06126 327 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 PGCP20142 388 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 CCL7P80098 99 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ZNF684Q5T5D7 378 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 HIST3H2AQ7L7L0 130 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 APCDD1LQ8NCL9 501 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 HIST1H2ACQ93077 130 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
VPS33B-202ENST00000535906 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 RXFP3Q9NSD7 469 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 TAS2R5Q9NYW4 299 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
VPS33B-202ENST00000535906 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 ADAM10O14672 748 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 SIGLEC6O43699 453 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 CDC40O60508 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPS33B-202ENST00000535906 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-202ENST00000535906 PNLIPP16233 465 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 RAB25P57735 213 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 TNK1Q13470 666 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 CBFBQ13951 182 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 PWWP2BQ6NUJ5 590 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 OR6V1Q8N148 313 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 OR5H6Q8NGV6 325 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 CEP76Q8TAP6 659 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 SAP25Q8TEE9 199 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 THAP3Q8WTV1 239 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-202ENST00000535906 RELTQ969Z4 430 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 KLHDC2Q9Y2U9 406 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms