RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 EMC3Q9P0I2 261 aa11.14□□□□□ -0.63
COPB1-208ENST00000532088 MAGED1Q9Y5V3 778 aaPredicted RBP11.14□□□□□ -0.63
COPB1-208ENST00000532088 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
COPB1-208ENST00000532088 NBEAQ8NFP9 2946 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 A0A1B0GUH1 482 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 BLOC1S5-TXNDC5H3BN57 136 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 EI24O14681 340 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
COPB1-208ENST00000532088 TGM6O95932 706 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ADORA3P0DMS8 318 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ZNF43P17038 809 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 CDH2P19022 906 aaPredicted RBP11.13□□□□□ -0.63
COPB1-208ENST00000532088 IGFBP5P24593 272 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 SLC6A6P31641 620 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 RAD23AP54725 363 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ESRRGP62508 458 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 FAM205BPQ63HN1 556 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 MTFR2Q6P444 385 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 NHLRC1Q6VVB1 395 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 RPTNQ6XPR3 784 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 DPY19L2P2Q6ZN68 376 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 SEM1Q6ZVN7 128 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 HDDC2Q7Z4H3 204 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 UEVLDQ8IX04 471 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 DNAJA3Q96EY1 480 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 TNFRSF13CQ96RJ3 184 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 VCX3BQ9H321 246 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 OR52D1Q9H346 318 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 INIPQ9NRY2 104 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 KRT84Q9NSB2 600 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 KLHL13Q9P2N7 655 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 REV1Q9UBZ9 1251 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
COPB1-208ENST00000532088 SEC14L4Q9UDX3 406 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 TMEFF2Q9UIK5 374 aaPredicted RBP11.13□□□□□ -0.63
COPB1-208ENST00000532088 TINAGQ9UJW2 476 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 ING1Q9UK53 422 aaPredicted RBP11.13□□□□□ -0.63
COPB1-208ENST00000532088 BAIAP2Q9UQB8 552 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 RCE1Q9Y256 329 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 MEMO1Q9Y316 297 aa11.13□□□□□ -0.63
COPB1-208ENST00000532088 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 IGHV3-15A0A0B4J1V0 119 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 TRGV8A0A0C4DH27 118 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 HSPB2A8KAH6 182 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 CENPBD1B2RD01 187 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 H0YJX3 145 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 PDLIM1O00151 329 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 SOCS2O14508 198 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 IMPA2O14732 288 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ARPC3O15145 178 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ZNHIT1O43257 154 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 RNF13O43567 381 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 IDH3BO43837 385 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 IL18BPO95998 194 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 TP53P04637 393 aaPredicted RBP11.12□□□□□ -0.63
COPB1-208ENST00000532088 YES1P07947 543 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 CD14P08571 375 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 GLI4P10075 376 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 POU2F1P14859 743 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 AQP2P41181 271 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 DAP3P51398 398 aaKnown RBP11.12□□□□□ -0.63
COPB1-208ENST00000532088 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 MRPL49Q13405 166 aaKnown RBP11.12□□□□□ -0.63
COPB1-208ENST00000532088 HSPB2Q16082 182 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 OR52L1Q8NGH7 329 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 OR51A7Q8NH64 312 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ABHD3Q8WU67 409 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ADAD1Q96M93 576 aaKnown RBP11.12□□□□□ -0.63
COPB1-208ENST00000532088 GABARAPL3Q9BY60 117 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 VCXQ9H320 206 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 SMURF2Q9HAU4 748 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 PARPBPQ9NWS1 579 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
COPB1-208ENST00000532088 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 SVILO95425 2214 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 RAMP1O60894 148 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 TXNDC12O95881 172 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 PLGP00747 810 aaPredicted RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 ZNF26P17031 533 aaPredicted RBP11.11□□□□□ -0.63
COPB1-208ENST00000532088 KLK2P20151 261 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 AHCYP23526 432 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 COL8A1P27658 744 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 PEX2P28328 305 aa11.11□□□□□ -0.63
COPB1-208ENST00000532088 RPS6KA3P51812 740 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms