RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LINC00471Q8N535 108 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 LRRC75AQ8NAA5 344 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 PYDC1Q8WXC3 89 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 APH1AQ96BI3 265 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 OR10A4Q9H209 315 aa12.79□□□□□ -0.36
CPSF1-206ENST00000531480 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 PTP4A3O75365 173 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 HIST1H2ABP04908 130 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 FPR3P25089 353 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 GSSP48637 474 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 P2RY6Q15077 328 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 EXOC3L2Q2M3D2 409 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 STAC2Q6ZMT1 411 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 HIST3H2AQ7L7L0 130 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 RRM2BQ7LG56 351 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 AAED1Q7RTV5 226 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 KIF18BQ86Y91 864 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 UEVLDQ8IX04 471 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 PQLC1Q8N2U9 271 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 HIST1H2ACQ93077 130 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 LRR1Q96L50 414 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 OR2M2Q96R28 347 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 GPA33Q99795 319 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 SIGLEC7Q9Y286 467 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 PKDREJQ9NTG1 2253 aa12.78□□□□□ -0.36
CPSF1-206ENST00000531480 ARRDC5A6NEK1 342 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 EFCAB9A8MZ26 197 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 BLOC1S5-TXNDC5H3BN57 136 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 TNFRSF11BO00300 401 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CST1P01037 141 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 IGHMP01871 453 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 SAGP10523 405 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 UGT2B10P36537 528 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 AQP2P41181 271 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 GPR4P46093 362 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 SELENOPP49908 381 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CLDN17P56750 224 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 FXYD6P3P58550 94 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 PRPS1P60891 318 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 POU3F1Q03052 451 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 FAM27E3Q08E93 113 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 FOXD4Q12950 439 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 ZBED5Q49AG3 693 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 TSPO2Q5TGU0 170 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 SP5Q6BEB4 398 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CASP12Q6UXS9 341 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 OAFQ86UD1 273 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 WDFY1Q8IWB7 410 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF100Q8IYN0 542 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 OR6X1Q8NH79 312 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 MOSPD2Q8NHP6 518 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 FAM46AQ96IP4 442 aaKnown RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 ADAD1Q96M93 576 aaKnown RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 SLCO5A1Q9H2Y9 848 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 REEP1Q9H902 201 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 NTN4Q9HB63 628 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 MCCC2Q9HCC0 563 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-206ENST00000531480 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 DNAJB9Q9UBS3 223 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CENPEQ02224 2701 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CACNA1DQ01668 2161 aa12.77□□□□□ -0.37
CPSF1-206ENST00000531480 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 RNF13O43567 381 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 AKAP8O43823 692 aaKnown RBP12.76□□□□□ -0.37
CPSF1-206ENST00000531480 OR6A2O95222 327 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 POU2F1P14859 743 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 AHCYP23526 432 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 IFNGR2P38484 337 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 ITGADQ13349 1161 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 C1DQ13901 141 aaKnown RBP12.76□□□□□ -0.37
CPSF1-206ENST00000531480 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 TAF11Q15544 211 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 MICAQ29983 383 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 SLC35D2Q76EJ3 337 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 MEX3DQ86XN8 651 aaKnown RBP12.76□□□□□ -0.37
CPSF1-206ENST00000531480 OR13C2Q8NGS9 318 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 INIPQ9NRY2 104 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 MED29Q9NX70 200 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 GPR52Q9Y2T5 361 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 SAMHD1Q9Y3Z3 626 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms